Sequence of DPV Potato virus Y

Potato virus Y isolate SL053 coat protein (cp) gene, partial cds.

ACC No: EF063710

Dated: 2006-11-26 | Length: 804 | CRC: -1817350319

                
ID   EF063710; SV 1; linear; genomic RNA; STD; VRL; 804 BP.
XX
AC   EF063710;
XX
DT   26-NOV-2006 (Rel. 89, Created)
DT   26-NOV-2006 (Rel. 89, Last updated, Version 1)
XX
DE   Potato virus Y isolate SL053 coat protein (cp) gene, partial cds.
XX
KW   .
XX
OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-804
RA   Zheng S., Liu Z.;
RT   "Strain identification and detection of the incidence of PVY disease in
RT   Guizhou";
RL   Unpublished.
XX
RN   [2]
RP   1-804
RA   Zheng S., Liu Z.;
RT   ;
RL   Submitted (16-OCT-2006) to the EMBL/GenBank/DDBJ databases.
RL   Key Lab, Guizhou Agricultural Academy of Science, Guiyang, Guizhou 550006,
RL   P.R. China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .804
FT                   /organism="Potato virus Y"
FT                   /specific_host="potato"
FT                   /isolate="SL053"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /PCR_primers="fwd_seq: gcaaatgacacaattgatgc, rev_seq:
FT                   tcacatgttcttgactccaag"
FT                   /note="from Immunocapture-RT-PCR"
FT                   /db_xref="taxon:12216"
FT   gene            <1. .804
FT                   /gene="cp"
FT   CDS             <1. .804
FT                   /codon_start=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /protein_id="ABK78923.1"
FT                   /translation="ANDTNDAGGSSKKDARPEQGSIQSNPNKGKDKDVNAGTSGTHTVP
FT                   RIKAITSKMRMPKSKGATVLNLEHLLEYAPQQIDISNTRATQSQFDTWYEAVRMAYDIG
FT                   ETEMPTVMNGLMVWCIENGTSPNVNGVWVMMDGDEQVEYPLKPIVENAKPTLRQIMAHF
FT                   SDVAEAYIEMRNKKEPYMPRYGLIRNLRDVGLARYAFDFYEVTSRTPVRAREAHIQMKA
FT                   AALKSAQPRLFGLDGGISTQEENTERHTTEDVSPSMHTLLGVKNM"
XX
SQ   Sequence 804 BP; 271 A; 164 C; 202 G; 167 T; 0 other;

ef063710 Length: 804  26-NOV-2006  Type: N  Check: 2574  ..

       1  gcaaatgaca caaatgatgc aggaggaagc agcaagaaag atgcaagacc
      51  agagcaaggc agcatccagt caaacccgaa caaaggaaaa gataaggatg
     101  tgaatgctgg tacatctggg acacatactg tgccgagaat caaggctatc
     151  acgtccaaaa tgagaatgcc caaaagcaag ggagcaaccg tgctaaactt
     201  agaacacttg cttgagtatg ctccacaaca aattgatatt tcaaatactc
     251  gagcaactca atcacagttt gatacgtggt atgaggcagt gcggatggca
     301  tacgacatag gagaaactga aatgccaact gtgatgaatg ggcttatggt
     351  ttggtgcatt gaaaatggaa cctcgccaaa tgtcaacgga gtctgggtta
     401  tgatggatgg ggatgaacaa gtcgagtacc cgttgaaacc aatcgttgaa
     451  aatgcaaaac caacccttag gcaaatcatg gcacatttct cagatgttgc
     501  agaagcgtat atagaaatgc gcaacaaaaa ggaaccatat atgccacgat
     551  atggtttaat tcgaaatctg cgggatgtgg gtttagcgcg ttatgccttt
     601  gacttttatg aggtcacatc acgaacacca gtgagggcta gggaagcgca
     651  cattcaaatg aaggccgcag cattgaaatc agcccaacct cgacttttcg
     701  ggttggacgg tggcatcagt acacaagagg agaacacaga gaggcacacc
     751  accgaggatg tctctccaag tatgcatact ctacttggag tcaagaacat
     801  gtga