Sequence of DPV Capsicum chlorosis virus

Capsicum chlorosis virus isolate PG23 nucleocapsid protein gene, partial cds.

ACC No: EF100603

Dated: 2009-12-01 | Length: 825 | CRC: -1554514538

                
ID   EF100603; SV 1; linear; genomic RNA; STD; VRL; 825 BP.
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AC   EF100603;
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DT   01-DEC-2009 (Rel. 103, Created)
DT   01-DEC-2009 (Rel. 103, Last updated, Version 1)
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DE   Capsicum chlorosis virus isolate PG23 nucleocapsid protein gene, partial
DE   cds.
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KW   .
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OS   Capsicum chlorosis virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-825
RA   Huang C.H., Chen C.C., Chen L.W., Chen T.C., Yeh S.D., Chang C.A.;
RT   "Molecular characterization of an isolate of Capsicum chlorosis virus
RT   infecting calla lily";
RL   Unpublished.
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RN   [2]
RP   1-825
RA   Huang C.H., Chen C.C., Chen L.W., Chen T.C., Yeh S.D., Chang C.A.;
RT   ;
RL   Submitted (02-NOV-2006) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, Taiwan Agriculture Research, 189 Chung-Cheng Road, Wu
RL   Feng, Taichung 41301, Taiwan ROC
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FH   Key             Location/Qualifiers
FH
FT   source          1. .825
FT                   /organism="Capsicum chlorosis virus"
FT                   /host="calla lily"
FT                   /isolate="PG23"
FT                   /serotype="WSMoV"
FT                   /mol_type="genomic RNA"
FT                   /country="Taiwan"
FT                   /db_xref="taxon:163325"
FT   CDS             1. .>825
FT                   /codon_start=1
FT                   /product="nucleocapsid protein"
FT                   /protein_id="ABO15813.1"
FT                   /translation="MSNVRQLTEKKIRELLAGGTADVEIETEDSTPGFSFKTFYDNNKS
FT                   VEMTFTNCLNILKCRKQIFAACKSGKYKFCEKTIVSTDANVGPEDWTFKRTEALIRVKM
FT                   INMVEKSKNESAKQEMYAKVMELPLVAAYGLNIPALFDSCALRMMLCIGGPLPLLSSIK
FT                   GLAPIIFPLAYYQNVKKEKLGIKNFSTYEQVCKVAKVLSASQIEFKEDLNTLFKQAVKL
FT                   LSESNPGTASSISLKKYDEQVKYMDKAFSANLSVDDYGAHSKKSSKPSTSIEV"
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SQ   Sequence 825 BP; 269 A; 128 C; 181 G; 247 T; 0 other;

ef100603 Length: 825  01-DEC-2009  Type: N  Check: 1645  ..

       1  atgtctaacg tcaggcaact taccgagaag aaaattagag aacttttggc
      51  tggtggaact gcagatgttg aaattgagac tgaggattca actcctggat
     101  tcagtttcaa gacattctat gataataaca agagcgttga aatgactttc
     151  acaaactgtc ttaatatttt gaagtgtaga aagcagattt ttgctgcttg
     201  caaaagtgga aagtataagt tctgtgaaaa aacaattgtt tctacagatg
     251  ctaatgttgg tccggaggat tggactttta agagaacaga agctttaata
     301  agagttaaga tgatcaacat ggtagaaaag agcaagaatg aaagtgctaa
     351  gcaagagatg tatgcaaagg tgatggaatt acctttagtg gcagcatatg
     401  gattgaacat acctgctttg tttgattcat gtgctctcag gatgatgtta
     451  tgtattggtg gtcctctacc actattatcc agcattaaag gccttgcacc
     501  aattattttc ccattagctt attaccaaaa tgttaaaaaa gagaaattgg
     551  gcatcaaaaa cttctctacc tatgagcagg tttgcaaagt ggctaaagtt
     601  ctttctgctt ctcaaataga gtttaaggaa gatctgaaca cattgttcaa
     651  acaggctgtc aagttgctta gtgaaagcaa ccctggtact gctagttcta
     701  tctcacttaa gaagtatgat gagcaagtca agtatatgga caaagcgttt
     751  agtgccaatt tgtctgtgga tgattatggt gctcattcaa agaagagctc
     801  aaagcctagt acttctatag aggtg