Sequence of DPV Capsicum chlorosis virus

Capsicum chlorosis virus isolate PG25 nucleocapsid protein gene, partial cds.

ACC No: EF100604

Dated: 2009-12-01 | Length: 825 | CRC: 1871050300

                
ID   EF100604; SV 1; linear; genomic RNA; STD; VRL; 825 BP.
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AC   EF100604;
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DT   01-DEC-2009 (Rel. 103, Created)
DT   01-DEC-2009 (Rel. 103, Last updated, Version 1)
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DE   Capsicum chlorosis virus isolate PG25 nucleocapsid protein gene, partial
DE   cds.
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KW   .
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OS   Capsicum chlorosis virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-825
RA   Huang C.H., Chen C.C., Chen L.W., Chen T.C., Yeh S.D., Chang C.A.;
RT   "Molecular characterization of an isolate of Capsicum chlorosis virus
RT   infecting calla lily";
RL   Unpublished.
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RN   [2]
RP   1-825
RA   Huang C.H., Chen C.C., Chen L.W., Chen T.C., Yeh S.D., Chang C.A.;
RT   ;
RL   Submitted (02-NOV-2006) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, Taiwan Agriculture Research, 189 Chung-Cheng Road, Wu
RL   Feng, Taichung 41301, Taiwan ROC
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FH   Key             Location/Qualifiers
FH
FT   source          1. .825
FT                   /organism="Capsicum chlorosis virus"
FT                   /host="calla lily"
FT                   /isolate="PG25"
FT                   /serotype="WSMoV"
FT                   /mol_type="genomic RNA"
FT                   /country="Taiwan"
FT                   /db_xref="taxon:163325"
FT   CDS             1. .>825
FT                   /codon_start=1
FT                   /product="nucleocapsid protein"
FT                   /protein_id="ABO15814.1"
FT                   /translation="MSNVRQLTEKKIRELLAGGTADVEIETEDSTPGFSFKTFYDNNKS
FT                   VEMTFTNCLNILKCRKQIFAACKSGKYKFCEKTIVSTDANVGPEDWTFKRTEALIRVKM
FT                   INMVEKSNNEGARQEMYAKVMELPLVAAYGLNIPASFDSCALRMMLCIGGPLPLLSSIK
FT                   GLAPIIFPLAYYQNVKKEKLGIKNFSTYEQVCKVAKVLSASQIEFKEDLNTLFKQAVKL
FT                   LSESNPGTASSISLKKYDDQVKYMDKAFSANLSVDDYGVHSKKSSKPSTSIEV"
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SQ   Sequence 825 BP; 275 A; 133 C; 175 G; 242 T; 0 other;

ef100604 Length: 825  01-DEC-2009  Type: N  Check: 8264  ..

       1  atgtctaacg tcaggcaact taccgagaag aaaattagag aactcttggc
      51  tggcggaact gcagatgttg aaattgaaac tgaggattca actcctggat
     101  tcagtttcaa gacattctat gataataaca aaagcgttga aatgactttc
     151  acaaactgtc ttaatatttt gaagtgtaga aagcagattt ttgctgcttg
     201  caaaagtgga aagtataagt tctgtgaaaa aacaattgtt tctacagatg
     251  ctaatgttgg tccggaggat tggactttta agagaacaga agctttaata
     301  agagttaaga tgatcaacat ggtagaaaag agcaataatg aaggtgctag
     351  acaagagatg tatgcaaagg tgatggaatt acctttagtg gcagcatacg
     401  gattgaacat accagcttca tttgattcat gtgctctcag gatgatgtta
     451  tgtattggtg gtcctctacc actattatcc agcattaaag gccttgcacc
     501  aattattttc ccattagctt attaccaaaa tgttaaaaaa gagaaattgg
     551  gcatcaaaaa cttctctacc tatgaacagg tctgcaaagt ggctaaggtt
     601  ctttctgctt ctcaaataga atttaaggaa gatctgaaca cattgttcaa
     651  acaggctgtc aagttgctta gtgaaagcaa ccccggtaca gctagttcta
     701  tctcacttaa gaagtatgat gatcaagtca agtatatgga caaagcgttt
     751  agtgccaatt tgtctgtgga tgattatggt gttcattcaa agaagagctc
     801  aaagcctagt acttctatag aagtg