Sequence of DPV Capsicum chlorosis virus

Capsicum chlorosis virus nucleocapsid protein gene, partial cds.

ACC No: EF101343

Dated: 2010-09-07 | Length: 825 | CRC: 1300897093

                
ID   EF101343; SV 1; linear; viral cRNA; STD; VRL; 825 BP.
XX
AC   EF101343;
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DT   01-DEC-2009 (Rel. 103, Created)
DT   07-SEP-2010 (Rel. 106, Last updated, Version 2)
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DE   Capsicum chlorosis virus nucleocapsid protein gene, partial cds.
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KW   .
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OS   Capsicum chlorosis virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-825
RX   AGRICOLA; IND44309121.
RX   DOI; 10.1094/PDIS-93-12-1346A.
RA   Chen C.C., Huang C.H., Cheng Y.H., Chen T.C., Yeh S.D., Chang C.A.;
RT   "First Report of Capsicum chlorosis virus Infecting Amaryllis and Blood
RT   Lily in Taiwan";
RL   Plant Dis. 93(12):1346-1346(2009).
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RN   [2]
RP   1-825
RA   Chiang F.L., Chen C.C., Chen T.C., Yeh S.D., Cheng Y.H., Chang C.A.;
RT   "Molecular characterization of an isolate of Capsicum chlorosis virus
RT   infecting amaryllis";
RL   Unpublished.
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RN   [3]
RP   1-825
RA   Chiang F.L., Chen C.C., Chen T.C., Yeh S.D., Cheng Y.H., Chang C.A.;
RT   ;
RL   Submitted (02-NOV-2006) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, Taiwan Agriculture Research, 189 Chung-Cheng Road, Wu
RL   Feng, Taichung 41301, Taiwan ROC
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FH   Key             Location/Qualifiers
FH
FT   source          1. .825
FT                   /organism="Capsicum chlorosis virus"
FT                   /host="Amaryllis"
FT                   /isolate="AHL1"
FT                   /serotype="WSMoV"
FT                   /mol_type="viral cRNA"
FT                   /country="Taiwan"
FT                   /db_xref="taxon:163325"
FT   CDS             1. .>825
FT                   /codon_start=1
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:D2CGF7"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:D2CGF7"
FT                   /protein_id="ABO16405.1"
FT                   /translation="MSNVRQLTEKKIRELLAGGTADVEIETEDSTPGFSFKTFYDNNKS
FT                   VEMTFTNCLNILKCRKQIFAACKSGKYKFCEKTIVSTDANVGPEDWTFKRTEALIRVKM
FT                   INMVEKSNNEGARQEMYAKVMELPLVAAYGLNIPASFDSCALRMMLCIGGPLPLLSSIK
FT                   GLAPIIFPLAYYQNVKKEKLGIKNFSTYEQVCKVAKVLSASQIEFKEDLNTLFKQAVKL
FT                   LSESNPGTASSISLKKYDDQVKYMDKAFSANLSVDDYGVHSKKSSKPSTSIEV"
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SQ   Sequence 825 BP; 274 A; 133 C; 175 G; 243 T; 0 other;

ef101343 Length: 825  07-SEP-2010  Type: N  Check: 8612  ..

       1  atgtctaacg tcaggcaact taccgagaag aaaattagag aactcttggc
      51  tggcggaact gcagatgttg aaattgaaac tgaggattca actcctggat
     101  tcagtttcaa gacattctat gataataaca aaagcgttga aatgactttc
     151  acaaactgtc ttaatatttt gaagtgtaga aagcagattt ttgctgcttg
     201  caaaagtgga aagtataagt tctgtgaaaa aacaattgtt tctacagatg
     251  ctaatgttgg tccagaggat tggactttta agagaacaga agctttaata
     301  agagttaaga tgatcaacat ggtagaaaag agcaataatg aaggtgctag
     351  acaagagatg tatgcaaagg tgatggaatt acctttagtg gcagcatacg
     401  gattgaacat acctgcttcg tttgattcat gtgctctcag gatgatgtta
     451  tgtattggtg gtcctctacc actattatcc agcattaaag gccttgcacc
     501  aattattttc ccattagctt attaccaaaa tgttaaaaaa gagaaattgg
     551  gcatcaaaaa cttctctacc tatgaacagg tctgcaaagt ggctaaggtt
     601  ctttctgctt cccaaataga atttaaggaa gatctgaaca cattgttcaa
     651  acaggctgtc aagttgctta gtgaaagtaa ccccggtaca gctagttcta
     701  tctcacttaa gaagtatgat gatcaagtca agtatatgga caaagcgttt
     751  agtgccaatt tgtctgtgga tgattatggt gttcattcaa agaagagctc
     801  aaagcctagt acttctatag aagtg