Sequence of DPV Watermelon mosaic virus

Watermelon mosaic virus isolate Ch99/69 polyprotein gene, partial cds.

ACC No: EF127832

Dated: 2006-12-23 | Length: 1154 | CRC: 673629295

                
ID   EF127832; SV 1; linear; genomic RNA; STD; VRL; 1154 BP.
XX
AC   EF127832;
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DT   23-DEC-2006 (Rel. 90, Created)
DT   23-DEC-2006 (Rel. 90, Last updated, Version 1)
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DE   Watermelon mosaic virus isolate Ch99/69 polyprotein gene, partial cds.
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KW   .
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OS   Watermelon mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-1154
RA   Gu Q., Peng B., Liu L., Meng J.;
RT   "Cloning and Sequencing Analysis of Watermelon mosaic virus";
RL   Unpublished.
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RN   [2]
RP   1-1154
RA   Gu Q., Peng B., Liu L., Meng J.;
RT   ;
RL   Submitted (20-NOV-2006) to the EMBL/GenBank/DDBJ databases.
RL   Biotechnology Center, Zhengzhou Fruit Research Institute, Chinese Academy
RL   of Agricultural Sciences, Hanghaidong, Zhengzhou, Henan 450009, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1154
FT                   /organism="Watermelon mosaic virus"
FT                   /isolate="Ch99/69"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /isolation_source="leaf of zucchini (Cucurbita pepo)"
FT                   /db_xref="taxon:146500"
FT   CDS             <1. .1128
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="ABL75785.1"
FT                   /translation="EIMHRTEAICAAMIEAWGYTELLQEIRKFYLWLLSKDEFKELAAS
FT                   GKAPYIAETALKKLYTDVNTQPSELQRYLEVLDFNHTDGCCESVSLQSGKEKETVENLD
FT                   AGKDSKKDTSGKGDKPQNLQTGQGSKEPTKAGTVSKDVNVGSKGKEVPRLQKITKKMNL
FT                   PTVGGKIILSLDHLLEYKPNQVDLFNTRATKTQFESWYSAVKVEYDLNDEQMGVIMNGF
FT                   MVWCIDNGTSPDVNGVWVMMDGEEQVECPLKPIVENAKPTLRQIMHHFSDAAEAYIEMR
FT                   NSESPYMPRYGLLRNLRDRELARYAFDFYEVTSKTPNRAREAIAQMKAAALAGINSRLF
FT                   GLDGNISTNSENTERHTARDVNQNMHTLLGMGPPQ"
FT   mat_peptide     <1. .276
FT                   /product="NIb"
FT   mat_peptide     277. .1125
FT                   /product="coat protein"
FT   3'UTR           1129. .1154
XX
SQ   Sequence 1154 BP; 399 A; 211 C; 279 G; 265 T; 0 other;

ef127832 Length: 1154  23-DEC-2006  Type: N  Check: 8992  ..

       1  gaaattatgc accgcactga ggcaatttgt gcagccatga ttgaagcgtg
      51  gggatatact gaacttttac aagaaattcg caaattttat ttgtggcttc
     101  tgagcaaaga tgaatttaag gaactcgcag catctggaaa agccccgtac
     151  atagctgaga cagcgttgaa gaagctctac acagatgtta atacacaacc
     201  aagtgaattg caaagatacc ttgaagttct ggatttcaac cacactgatg
     251  gttgctgtga gtcagtgtct ctgcaatcag gaaaagaaaa agaaacagtg
     301  gaaaatttgg atgcagggaa ggattcgaag aaagacacca gcggcaaagg
     351  tgataagcca caaaacctgc aaactgggca gggtagcaag gaaccaacaa
     401  aagctggcac agtcagcaaa gatgtgaacg ttggatcgaa aggaaaagaa
     451  gtcccacgac tacagaagat aacaaagaaa atgaaccttc caacagttgg
     501  tgggaaaatc attctcagct tagaccattt gctcgaatac aagcccaatc
     551  aagttgattt gttcaacact cgagcaacaa aaacacagtt tgaatcatgg
     601  tacagcgcag ttaaagttga atatgatctt aatgatgagc agatgggtgt
     651  gattatgaat ggttttatgg tttggtgcat cgataatggt acatctccag
     701  atgtcaatgg agtatgggtg atgatggatg gggaagagca agttgagtgc
     751  ccactaaagc caattgttga aaacgcaaag ccaactttaa gacaaatcat
     801  gcatcatttc tcagacgcag cagaagcata tattgagatg agaaactctg
     851  aaagtccgta tatgcctaga tacggattac taagaaattt gagagacagg
     901  gaattagcac gctatgcttt tgacttctat gaggttactt ccaaaacacc
     951  aaacagggca agagaagcaa tagcacagat gaaggccgca gctctcgcgg
    1001  gaattaacag caggttattt ggacttgatg gcaatatctc gaccaattcc
    1051  gaaaatactg agaggcacac tgcaagggac gttaatcaga atatgcacac
    1101  tttgttgggt atgggtccac cgcagtaaag gctaggtaaa ctggtcacag
    1151  ttag