Sequence of DPV Lily mottle virus

Lily mottle virus clone LMoV-BJ coat protein (CP) mRNA, partial cds.

ACC No: EF158108

Dated: 2006-12-16 | Length: 825 | CRC: 585920604

                
ID   EF158108; SV 1; linear; mRNA; STD; VRL; 825 BP.
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AC   EF158108;
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DT   16-DEC-2006 (Rel. 90, Created)
DT   16-DEC-2006 (Rel. 90, Last updated, Version 1)
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DE   Lily mottle virus clone LMoV-BJ coat protein (CP) mRNA, partial cds.
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KW   .
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OS   Lily mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-825
RA   Xu R.X., Ming J., Mu D., Liu C., Tang G., Wang X.;
RT   "Detection of three Lily viruses by Multiplex-RT-PCR";
RL   Unpublished.
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RN   [2]
RP   1-825
RA   Xu R.X., Ming J., Tang G., Mu D., Liu C.;
RT   ;
RL   Submitted (15-NOV-2006) to the EMBL/GenBank/DDBJ databases.
RL   Department of Flower Breeding and Cultivation, Institute of Vegetables and
RL   Flowers, 12 Zhongguancun South Street, Beijing 1000081, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .825
FT                   /organism="Lily mottle virus"
FT                   /specific_host="Lily longiflorum Snow Queen"
FT                   /mol_type="mRNA"
FT                   /country="China:Beijing"
FT                   /isolation_source="leaf"
FT                   /clone="LMoV-BJ"
FT                   /virion
FT                   /PCR_primers="fwd_seq: gcaaatgagacacttaacgct, rev_seq:
FT                   catagaaattccaagtaagggg"
FT                   /db_xref="taxon:32624"
FT   gene            <1. .>825
FT                   /gene="CP"
FT   CDS             <1. .>825
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="ABL63515.1"
FT                   /translation="ANETLNAGASSSTQTSRPARPETAAVDVAPQQSPEPRVRDRDVDA
FT                   GTVGTFQIPRLKALATKISIPKIRGRTIVNLGHLANYNPEQTDISNTRSTQKQFETWYN
FT                   AVKDEYGLNDESMALTMNGLMVWCIENGTSPNINGAWLMMDGDQQVEFPLRPIIEHAKP
FT                   TLRQIMAHFSHLAEAYIEKQNAEKPYMPRYGLQRNLTDFTLARFAFDFYEVTSRTPARA
FT                   KEAHFQMKTAALRGKQSKLFGLDGKVTTQDEDTERHTADDVNKNMHPLLGISM"
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SQ   Sequence 825 BP; 256 A; 204 C; 198 G; 167 T; 0 other;

ef158108 Length: 825  16-DEC-2006  Type: N  Check: 3333  ..

       1  gcaaatgaga cacttaacgc tggggcctct agctccacac aaacgagtcg
      51  cccagcacgt ccggaaactg ccgcggttga tgtagcacca caacagagcc
     101  ccgaaccaag agtacgcgat cgtgacgttg atgctggaac cgtgggaaca
     151  ttccaaattc cccgactaaa ggcattggcg acaaagatta gcattccaaa
     201  gattaggggg cggacaatag tcaaccttgg gcaccttgcg aattacaatc
     251  cagagcaaac agacatctct aatacaaggt cgactcagaa acagtttgag
     301  acatggtaca acgccgtgaa agatgagtac ggtctcaatg atgagagcat
     351  ggcactgacc atgaacggtc tgatggtttg gtgcattgag aatggcacct
     401  caccaaacat aaatggcgcg tggctcatga tggacggaga tcagcaagtt
     451  gaatttccat tacgtcccat aattgaacac gcaaaaccga cgctgcgcca
     501  gatcatggcg catttctcac atcttgctga agcatatatt gagaaacaaa
     551  atgcagagaa accgtacatg cctaggtacg gccttcagcg aaatctcact
     601  gatttcacgc tagcacgatt cgctttcgac ttctatgaag ttacttcacg
     651  cacgcctgcg cgagcgaagg aagcacactt ccagatgaaa acagccgctt
     701  tacgcggaaa acaatcgaag ctatttgggt tagatggaaa ggtgaccacc
     751  caagatgagg acacggagag gcatacagca gacgatgtca ataaaaacat
     801  gcacccctta cttggaattt ctatg