Sequence of DPV Hop latent virus

Hop latent virus isolate CH1 coat protein gene, complete cds.

ACC No: EF202598

Dated: 2007-02-10 | Length: 921 | CRC: 376994650

                
ID   EF202598; SV 1; linear; genomic RNA; STD; VRL; 921 BP.
XX
AC   EF202598;
XX
DT   10-FEB-2007 (Rel. 90, Created)
DT   10-FEB-2007 (Rel. 90, Last updated, Version 1)
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DE   Hop latent virus isolate CH1 coat protein gene, complete cds.
XX
KW   .
XX
OS   Hop latent virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC   Carlavirus.
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RN   [1]
RP   1-921
RA   Liu S., Han S., Zhu J., Xiang B., Cao L.;
RT   "Hop latent virus isolated from different humulus regions in Xinjiang,
RT   China";
RL   Unpublished.
XX
RN   [2]
RP   1-921
RA   Liu S., Han S., Zhu J., Xiang B., Cao L.;
RT   ;
RL   Submitted (28-DEC-2006) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, The Key Oasis Eco-agriculture Laboratory of Xinjiang
RL   Production and Construction Group, Shihezi University, Shihezi, Xinjiang
RL   832003, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .921
FT                   /organism="Hop latent virus"
FT                   /isolate="CH1"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Xinjiang, Changji"
FT                   /isolation_source="whole tissue lysate"
FT                   /db_xref="taxon:104263"
FT   CDS             1. .921
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="ABN11180.1"
FT                   /translation="MADKQGQMTEQQKVDSQRLQGEAKNKEKAESSKRKDELLKKYIDP
FT                   GLGSDDDEEEMVELRLSKLREFLARRRAAIRVTNAGLETGRPALKPSPDMLPDPTNPYN
FT                   KPSLDALLMIKPRVVSNNMATSEDMMKICVDLEGLGVPTEHVQSVILQAVFYCKDSSSS
FT                   PYVDPRGSFEWRGGAISADSVLAIIKKDAETLRRVCRLYAPLTWNYMLLHNNPPSDWSE
FT                   MGFQREDRFAAFDCLDYVENAAAVQPLEGLIRVPTAREKIANKTHKDLALRRANRNQLF
FT                   GNLDVEITGGKNGPELQRDYSKSNN"
XX
SQ   Sequence 921 BP; 250 A; 201 C; 266 G; 204 T; 0 other;

ef202598 Length: 921  10-FEB-2007  Type: N  Check: 2393  ..

       1  atggccgaca aacaaggaca gatgactgaa caacagaagg tggattctca
      51  gaggctgcag ggggaagcaa agaataaaga aaaagctgag tcctcaaaga
     101  ggaaagatga gttgcttaag aagtacattg atcctgggct agggtctgat
     151  gatgatgaag aggagatggt ggaattgagg ctgagcaaat tgagggagtt
     201  cctggctcgt agaagggccg ctattcgcgt gactaacgca gggctagaaa
     251  caggcaggcc cgcactcaag ccctcacccg acatgctgcc tgaccctacc
     301  aacccgtaca ataaaccctc gttggacgct ttgttgatga ttaagcctag
     351  ggtcgtgtca aacaacatgg ccacctcaga ggatatgatg aagatctgcg
     401  ttgatctgga ggggttgggc gtgcccactg aacacgtgca aagcgtgatc
     451  ttgcaagcgg tgttctattg caaggactcc agcagttcac cctatgtgga
     501  ccctcggggc tctttcgagt ggcgtggtgg ggcgatctcg gccgattcag
     551  tgcttgcgat aataaagaag gatgccgaga ccttgaggcg cgtttgcagg
     601  ttgtatgcac cactcacgtg gaactacatg ttgctacata acaatccccc
     651  ttctgactgg tccgaaatgg gctttcagcg cgaagatcgc tttgctgctt
     701  ttgattgctt ggattacgtt gaaaatgctg cggctgtgca accattggaa
     751  gggctgatca gagtccccac ggcaagagag aagattgcaa ataagactca
     801  taaggatcta gcgctgcgcc gtgcgaatag gaatcagctt ttcgggaatc
     851  tagatgtgga aataaccggg ggaaagaatg ggcccgagct tcaacgtgac
     901  tactctaagt ctaataatta a