Sequence of DPV Hyacinth mosaic virus

Hyacinth mosaic virus polyprotein gene, partial cds.

ACC No: EF203679

Dated: 2007-01-30 | Length: 1213 | CRC: 1849558366

                
ID   EF203679; SV 1; linear; genomic RNA; STD; VRL; 1213 BP.
XX
AC   EF203679;
XX
DT   30-JAN-2007 (Rel. 90, Created)
DT   30-JAN-2007 (Rel. 90, Last updated, Version 1)
XX
DE   Hyacinth mosaic virus polyprotein gene, partial cds.
XX
KW   .
XX
OS   Hyacinth mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1213
RA   Pham K.T.K., Langeveld S.A., Derks A.F.L.M.;
RT   "Development of a protocol for genetic transformation of hyacinths.
RT   Introduction of resistance against hyacinth mosaic virus (HyaMV)";
RL   Unpublished.
XX
RN   [2]
RP   1-1213
RA   Pham K.T.K., Langeveld S.A., Derks A.F.L.M.;
RT   ;
RL   Submitted (02-JAN-2007) to the EMBL/GenBank/DDBJ databases.
RL   Applied Plant Research; Section Flower Bulbs and Nursery Stocks, Wageningen
RL   UR, Postbus 85, 2160 AB, Lisse, The Netherlands
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1213
FT                   /organism="Hyacinth mosaic virus"
FT                   /specific_host="hyacinth"
FT                   /mol_type="genomic RNA"
FT                   /country="Netherlands"
FT                   /collection_date="May-1997"
FT                   /db_xref="taxon:421013"
FT   CDS             <1. .1053
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains NIb and coat protein"
FT                   /protein_id="ABM91770.1"
FT                   /translation="GSASMVEGWGHTRLLHEIRKFYAWVLEQAPYSEIAKMGGAPYISE
FT                   TALRRLYTLEEVADDELLRYLDALYDVDINENEMEVRHQSGETVDAGRGTQGRASSTPS
FT                   TGAQKDGKQMRDKDQDVDVGTTGLFTIPRFKSISGKMRAPQSAGKVVMNLDHLLRYEPE
FT                   QTHFVQHKGRHRNNLTSGTKGHRRYEVDEMYVLLLMDNVWCIEMTSPNINGVWVMMDGS
FT                   RTSEYPNRPLIEHAKPTFRQIMAHFSNMAEAYNEMRNSKQPYMPRYGLQRNLRDFSLAR
FT                   YAFDFYEITSRTPDRAREAHLQMKAAALKNVENKMFGLDGNVSTKGEDTERHTTDDVNA
FT                   HMHNMLGVRM"
XX
SQ   Sequence 1213 BP; 376 A; 240 C; 310 G; 287 T; 0 other;

ef203679 Length: 1213  30-JAN-2007  Type: N  Check: 1061  ..

       1  ggatccgctt cgatggtgga ggggtggggt catacacgtt tgctgcacga
      51  aatccggaaa ttctatgcat gggtgctaga acaggctcct tacagcgaaa
     101  ttgcgaagat gggtggcgca ccatacatct cagaaacagc actgaggcga
     151  ttgtacacac tagaagaagt ggctgacgat gaattgttgc gatatctcga
     201  cgcactttat gatgttgaca ttaatgagaa cgagatggaa gtacggcacc
     251  aatctggtga gactgtggat gccggaaggg gaacccaggg gcgagcaagc
     301  tcaacacctt ccactggtgc gcaaaaagac gggaagcaga tgagggacaa
     351  agatcaggac gtggacgttg gcaccacagg tctcttcaca attccacggt
     401  ttaagtcaat atctggtaag atgagagcac cacagagtgc aggaaaggtt
     451  gtcatgaatc ttgaccatct attgaggtat gaaccggaac aaacacattt
     501  tgtacaacac aagggtcgac acagaaacaa tttgacgagt ggtacaaaag
     551  gtcacagaag atacgaagtt gacgagatgt atgtccttct tctcatggat
     601  aatgtttggt gcatagaaat gacttcacca aatataaatg gagtgtgggt
     651  tatgatggat gggagtcgaa caagtgagta ccccaaccgt ccgttgattg
     701  aacatgcaaa gcccacattt aggcagataa tggctcattt cagtaacatg
     751  gctgaagcat ataatgaaat gcgaaactcg aaacaaccgt acatgccaag
     801  gtacggactt cagcgtaatt tgagagattt tagtttggcg aggtatgcat
     851  ttgatttcta tgaaattacc tcacgaacac cagatagagc aagggaagcc
     901  caccttcaga tgaaggcagc ggcccttaag aacgttgaaa acaaaatgtt
     951  tggacttgat gggaacgtct ccaccaaagg cgaggacacg gagagacaca
    1001  ccacggatga tgtgaatgct catatgcata acatgcttgg tgtccgtatg
    1051  taactcaata acacccataa ggggaaccag ttatccgtag tatcctttcc
    1101  tccgattgat tatattatgc atgtaatctt tccgaaaaca atccttcagg
    1151  agtgatgtag tgaggtttga cctcgtattc attcatgttg gctttgttct
    1201  agggacaaaa aaa