Sequence of DPV Veltheimia mosaic virus

Veltheimia mosaic virus isolate Pt7 polyprotein gene, partial cds.

ACC No: EF203687

Dated: 2007-01-30 | Length: 1187 | CRC: 1846079696

                
ID   EF203687; SV 1; linear; genomic RNA; STD; VRL; 1187 BP.
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AC   EF203687;
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DT   30-JAN-2007 (Rel. 90, Created)
DT   30-JAN-2007 (Rel. 90, Last updated, Version 1)
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DE   Veltheimia mosaic virus isolate Pt7 polyprotein gene, partial cds.
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KW   .
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OS   Veltheimia mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus; unclassified Potyvirus.
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RN   [1]
RP   1-1187
RA   Pham K.T.K., Derks A.F.L.M.;
RT   "Molecular characterization of potyviruses causing mosaic disease of Forest
RT   lily in the Netherlands";
RL   Unpublished.
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RN   [2]
RP   1-1187
RA   Pham K.T.K., Derks A.F.L.M.;
RT   ;
RL   Submitted (03-JAN-2007) to the EMBL/GenBank/DDBJ databases.
RL   Applied Plant Research; Section Flower Bulbs and Nursery Stocks, Wageningen
RL   UR, Postbus 85, 2160 AB, Lisse, The Netherlands
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1187
FT                   /organism="Veltheimia mosaic virus"
FT                   /specific_host="Veltheimia bracteata"
FT                   /isolate="Pt7"
FT                   /mol_type="genomic RNA"
FT                   /country="Netherlands"
FT                   /collection_date="Apr-2003"
FT                   /db_xref="taxon:421011"
FT   CDS             <1. .1062
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains NIb and coat protein"
FT                   /protein_id="ABM91777.1"
FT                   /translation="GIRLDGGGWGHTRLLHEIRKFYAWVLEQAPYSEIAKMGGAPYISE
FT                   TALRRLYTLEEVADDELLRYLDALYDVEITENEMEVRHQSGETVDAGRGTQGRASSTPS
FT                   TGTQKDGRQTKDKDQDVDVGTTGLFTIPRFKSISGKMRAPQSAGKVVMNLDHLLRYEPE
FT                   QTHLYNTRSTQKQFDEWYKRVTEEYEVDENGMSLLLNGLMVWCIENGTSPNINGVWVMM
FT                   DGSEQVEYPIRPLIEHAKPTFRQIMAHFSNMAEAYIEMRNAEEPYMPRYGLIRNLTDMS
FT                   LARYAFDFYEVHARTPVRAREAHMQMKAAALRGSTSRLFGLDGNVGDATEDTERHTADD
FT                   VNRNMHSLMGLKL"
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SQ   Sequence 1187 BP; 358 A; 243 C; 323 G; 261 T; 2 other;

ef203687 Length: 1187  30-JAN-2007  Type: N  Check: 2345  ..

       1  gggatccgct tggatggtgg agggtggggc catacacgtt tgctgcacga
      51  aatccggaaa ttctacgcat gggtgctaga acaggctccg tacagtgaaa
     101  ttgcgaagat gggtggcgca ccatacatct cagaaacagc actgaggcga
     151  ttgtacacac ttgaagaagt agctgacgat gaattgttgc gatatctcga
     201  cgcactntat gatgttgaaa tcactgagaa cgagatggaa gtgcggcacc
     251  agtctggtga gactgtggat gccggaaggg gaacncaggg gcgagcaagc
     301  tcaacacctt ccactggtac gcaaaaggac gggaggcaga cgaaggacaa
     351  agatcaggac gtggacgttg gcaccacagg tctctttaca attccacggt
     401  ttaagtcaat atctggtaag atgagagcac cacagagtgc aggaaaggta
     451  gtcatgaatc ttgatcatct attgaggtat gaaccagaac aaacacattt
     501  gtacaacaca aggtcaacac agaaacaatt tgacgagtgg tacaaaaggg
     551  tcacagaaga atacgaagtt gacgagaatg gtatgtccct tcttctcaat
     601  gggttaatgg tttggtgcat agaaaatggc acttcaccaa atataaatgg
     651  agtgtgggtt atgatggatg ggagtgaaca agtcgagtac ccaatccgtc
     701  cgttgattga acatgcaaag cccacattta ggcagataat ggctcatttc
     751  agtaacatgg ctgaagcata tattgaaatg cgcaacgctg aagaaccata
     801  tatgccacgc tatgggttaa ttcggaactt gaccgatatg agcttggctc
     851  gctacgcctt cgacttttac gaagtgcacg ctcgcacacc ggtgagagcg
     901  cgcgaagcgc acatgcagat gaaagcagca gcacttcgag gcagcacatc
     951  gcgcttgttt ggcttggatg gtaacgtggg cgatgccacc gaggatacgg
    1001  agcgacacac cgcggatgac gtgaaccgca acatgcacag tttgatgggt
    1051  ttaaagctgt aggacgttaa gtattgcttc ttaattagtt aacgctgtga
    1101  acgtccaagg atttcggagt tctagaacca atccagtgtg gtgtaccacc
    1151  tttgtgtcta gaacaatgag acaacaaaaa aaaaaaa