Sequence of DPV Moroccan watermelon mosaic virus

Moroccan watermelon mosaic virus polyprotein gene, partial cds.

ACC No: EF211959

Dated: 2008-04-03 | Length: 1647 | CRC: 482753139

                
ID   EF211959; SV 1; linear; genomic RNA; STD; VRL; 1647 BP.
XX
AC   EF211959;
XX
DT   14-FEB-2007 (Rel. 90, Created)
DT   03-APR-2008 (Rel. 95, Last updated, Version 2)
XX
DE   Moroccan watermelon mosaic virus polyprotein gene, partial cds.
XX
KW   .
XX
OS   Moroccan watermelon mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1647
RA   Arocha Y., Vigheri N., Nkoy-Florent B., Bakwanamaha K., Bolomphety B.,
RA   Kasongo M., Betts P., Monger W.A., Harju V., Mumford R.A., Jones P.;
RT   "First report of the identification of Moroccan watermelon mosaic virus in
RT   papaya in Democratic Republic of Congo";
RL   Plant Pathol. 57(2):387-387(2008).
XX
RN   [2]
RP   1-1647
RA   Monger W.A., Mumford R.;
RT   ;
RL   Submitted (09-JAN-2007) to the EMBL/GenBank/DDBJ databases.
RL   Central Science Laboratories, Sand Hutton, York Y041 1LZ, UK
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1647
FT                   /organism="Moroccan watermelon mosaic virus"
FT                   /mol_type="genomic RNA"
FT                   /country="Democratic Republic of the Congo"
FT                   /isolation_source="plant leaf"
FT                   /db_xref="taxon:167129"
FT   CDS             <1. .1446
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:A3F6R1"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:A3F6R1"
FT                   /protein_id="ABN14257.1"
FT                   /translation="TLMVLLAMHYALNKAGYNTAELQGNCVFYINGDDLCIAVHPDHEA
FT                   MLDTFQKSFNELGLNYDFTSRHKNKEDLWFMSHKGVLIDGLYIPKLEQERIVAILEWDK
FT                   AKLPEHRLEAISAAIIESWGYPELTNEIRKFYQWVLEQAPYSDLALKGKAPYVSEAGLR
FT                   NLYTSQRGSPQELERYITHYFKSESGDCPELMVYHQADNLKDAGQGVGEKEKKEKEKEK
FT                   EKDKKSSDDTGGSSSQDQGRKDKDKDVDVGTTGTFRVPKVKTFNDKMILPRVRGRIALN
FT                   LEHLLQYNPNQIDLSNTRATQNQFDRWYDGVKSDYGLDDEEMAIVLNGFMVWCIENGTS
FT                   PNINGVWTMMDNGEQVEYLLKPMIEHASPTLRQIMAHYSNAAEAYITKRNATERYMPRY
FT                   GQKRNLRDISLARYAFDFYEMTSKTPERAREAHMQMKAAAIRGANTRLFGIDGKVSGGE
FT                   ENTERHTVEDVDRDMHSLLGMRK"
FT   mat_peptide     <1. .597
FT                   /product="RNA dependent RNA polymerase NIb"
FT   mat_peptide     598. .1443
FT                   /product="coat protein"
FT   3'UTR           1447. .1647
XX
SQ   Sequence 1647 BP; 529 A; 309 C; 404 G; 405 T; 0 other;

ef211959 Length: 1647  03-APR-2008  Type: N  Check: 2151  ..

       1  actctaatgg tgctactggc tatgcattac gcactaaata aagctggtta
      51  caatacagcc gagcttcaag gaaattgtgt cttctacata aatggcgatg
     101  atttatgcat tgcggtccat cccgatcatg aagcaatgct tgacacattt
     151  caaaagtcat tcaacgaact ggggttaaat tatgatttca cctcgcgaca
     201  caagaacaag gaagatttgt ggtttatgtc acacaaaggt gttctaattg
     251  atgggctgta cattccaaaa cttgaacagg aacgaattgt agctattctt
     301  gagtgggaca aagcaaagtt gcctgagcat agactcgaag ccatctcagc
     351  agcgataatt gaatcatggg gttatccaga attgacaaat gagatacgga
     401  aattctacca gtgggttctt gaacaggcac cgtactctga tttagccctg
     451  aaaggtaaag caccttatgt ttctgaagca gggctcagaa acttatacac
     501  gtctcagcgc ggatctcccc aagaattgga gaggtacata actcactatt
     551  ttaagagtga gagtggggac tgtcctgagc tcatggtgta tcatcaagca
     601  gataatctta aagacgcagg acaaggcgta ggtgagaaag aaaagaaaga
     651  aaaagaaaaa gaaaaagaga aggacaagaa gtcctcagat gacacaggag
     701  gatcatcatc gcaagatcaa gggaggaagg ataaggacaa ggatgttgat
     751  gttggaacta ctggaacttt tagagttcca aaagttaaaa cattcaatga
     801  taaaatgatc ttgccaagag ttagagggcg aatcgcgtta aatctagagc
     851  atctcttgca gtacaatccc aaccaaatcg atttgtctaa cacaagagct
     901  actcaaaatc agttcgatag gtggtacgat ggagtgaaga gtgattatgg
     951  gttggatgat gaggaaatgg caattgtact caacgggttc atggtatggt
    1001  gcattgagaa tggcacatcc ccgaacataa atggagtgtg gactatgatg
    1051  gacaacgggg agcaagtgga gtacttgttg aagccaatga ttgagcacgc
    1101  atcccctact ctacggcaaa tcatggctca ttatagcaat gccgcagaag
    1151  catacattac caagagaaat gcaacagagc gctacatgcc tcgatacgga
    1201  caaaaacgaa accttaggga catcagtttg gctagatacg cttttgactt
    1251  ttatgaaatg acttcaaaga cacctgaaag ggcacgcgaa gcacacatgc
    1301  agatgaaagc agcagcaatc agaggtgcaa acactcgatt gtttggaatt
    1351  gatggaaagg ttagtggggg ggaagagaac acggagagac acactgtcga
    1401  agatgttgac cgcgatatgc atagccttct gggaatgcgc aagtgaggtc
    1451  tcggttctta cccgcgaagg agtctcttcc ctatatacta taaggtacac
    1501  ttattagtag cgaggctgtg cctcctttct tagtgtctag tgagggtatc
    1551  cctcctctta tccttattag tattcgagct atttgttcca gtttcgagtg
    1601  aggtttcacc tcgtgtgttt ctgtagcata tagtgagaga aaaaaaa