Sequence of DPV Chilli veinal mottle virus

Chilli veinal mottle virus isolate Be2 polyprotein gene, partial cds.

ACC No: EF213677

Dated: 2007-11-01 | Length: 1794 | CRC: -955060793

                
ID   EF213677; SV 1; linear; genomic RNA; STD; VRL; 1794 BP.
XX
AC   EF213677;
XX
DT   01-NOV-2007 (Rel. 93, Created)
DT   01-NOV-2007 (Rel. 93, Last updated, Version 1)
XX
DE   Chilli veinal mottle virus isolate Be2 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Chilli veinal mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1794
RA   Reddy C.N.L., Devaraju, Madhavi Reddy K., Krishnareddy M.,
RA   Venkataravanappa V., Jalali S., Usha Rani T.R., Raman L., Jalali S.,
RA   Ajith Prasad H.N.;
RT   "Molecular genetic diversity of Chilli veinal mottle virus infecting chilli
RT   pepper in India";
RL   Unpublished.
XX
RN   [2]
RP   1-1794
RA   Reddy C.N.L., Venkataravanappa V., Madhavi Reddy K., Krishnareddy M.;
RT   ;
RL   Submitted (28-DEC-2006) to the EMBL/GenBank/DDBJ databases.
RL   Division of Plant Pathology, Indian Institute of Horticultural Research,
RL   Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1794
FT                   /organism="Chilli veinal mottle virus"
FT                   /specific_host="Capsicum annuum"
FT                   /lab_host="Datura metel"
FT                   /isolate="Be2"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Bellary; Karnataka"
FT                   /isolation_source="leaf"
FT                   /virion
FT                   /db_xref="taxon:52280"
FT   CDS             <1. .1494
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="ABQ23259.1"
FT                   /translation="GQPSTVVDNTLMVLVAMRYSLRRLGINYKDQNSRCVFFANGDDLI
FT                   VSVPPSDEWILDSLQEPFSELGLSYDFGERTKERSELWFMSHQGILIEDQYIPKLEPER
FT                   IVSILEWDRAEQPEHRLEAICASMIEAWGYKELLHEIRLFYRWAIEQAPYSQLVSEGKA
FT                   PYISETALRCLYMSKHGESDISPYLRALIEGAKKEELDDEGGEVTHQSGESVDAGRVKG
FT                   EDSSSKPADKQATEKKNRLSGQAQPQSRQSEMEVPQVRDRDVNVGTSGTFTIPRLKGIS
FT                   SKLTIPKIKTKAVVNLEHLLDYAPEQIHLSNTRALQSQFASWYEGVKNDYDVTDEQMQI
FT                   ILNGLMVWCIENGTSPNINGYWVMMDGEEQVEYPIKPLIDHAKPSFRQIMAHFSNLAEA
FT                   YIEKRNSEKPYMPRYGLQRNLTDMSLARYAFDFYEMTSKTPVRAREAHIQMKAAALRGV
FT                   SNRMFGLDGRVGTQEEDTERHTTEDVNRNMHNLLGVRGL"
FT   mat_peptide     <1. .630
FT                   /product="nuclear inclusion b protein"
FT                   /note="Nib"
FT   mat_peptide     631. .1491
FT                   /product="coat protein"
FT   3'UTR           1495. .1794
XX
SQ   Sequence 1794 BP; 575 A; 330 C; 420 G; 469 T; 0 other;

ef213677 Length: 1794  01-NOV-2007  Type: N  Check: 5324  ..

       1  ggacaaccat cgacagtcgt ggataacaca ctcatggtat tagtagcaat
      51  gagatattca ttacgccgat tgggcatcaa ctacaaagat cagaacagta
     101  gatgtgtttt ctttgccaac ggcgatgatc tgatcgtctc agtaccacca
     151  agtgacgagt ggatattgga ttccttgcaa gaaccattct ctgagttggg
     201  cctgtcatat gattttggcg agcggacaaa agaaagatca gaactctggt
     251  ttatgtccca tcaaggaata ctaattgagg atcagtatat tccaaagctt
     301  gagcctgagc gcatagtttc aatccttgaa tgggatagag ctgagcaacc
     351  agaacaccgg cttgaagcca tttgcgcatc tatgattgaa gcatggggtt
     401  acaaagaatt gttacatgag ataaggcttt tctataggtg ggcgattgag
     451  caagcaccat attcacaact tgtctctgag gggaaggcac catacatttc
     501  ggaaacagca ctgaggtgcc tctacatgag taaacatgga gaaagtgaca
     551  ttagcccata tcttagagca cttattgaag gagctaagaa ggaagaatta
     601  gatgatgagg gtggagaagt cacccatcag tcgggagaga gtgttgacgc
     651  tggaagagtg aaaggcgaag attcatcaag taaaccagct gataaacaag
     701  ccacagagaa gaagaacagg ttgagtggac aagctcagcc acagtctcgc
     751  cagagtgaaa tggaagtacc ccaagttcga gacagagatg ttaatgtcgg
     801  aacctcagga acattcacaa taccgcgtct caagggtatt tcttcaaagt
     851  taacaatacc aaagatcaaa acgaaggctg ttgttaacct tgaacacctt
     901  cttgattatg cccctgaaca aattcatttg agtaatacaa gggcactaca
     951  atcacaattt gcatcttggt atgaaggtgt taagaatgac tatgatgtca
    1001  cagatgaaca gatgcaaata atattgaatg gattgatggt ttggtgtatt
    1051  gagaatggaa cgtcaccaaa cattaatggt tattgggtta tgatggatgg
    1101  agaagaacaa gttgaatacc caataaagcc attaattgat catgccaaac
    1151  catcatttag acaaatcatg gcgcatttta gcaatcttgc cgaagcgtac
    1201  attgagaagc gcaattctga gaagccatat atgccaagat atgggcttca
    1251  aagaaacctt accgatatgt cattagcgcg atatgctttc gatttctatg
    1301  aaatgacatc gaaaactccc gtccgagctc gtgaggcaca cattcaaatg
    1351  aaggcagccg cattacgtgg cgtcagcaac aggatgtttg gactggacgg
    1401  tagggtagga acacaggaag aggacaccga acggcacaca acagaggatg
    1451  tgaatagaaa catgcataat ctgctgggcg ttcgagggct gtgaacttca
    1501  acttttaact agtaataagt aacatattgt agtatatgta acttggttta
    1551  tgttgttgat catgcatatt cttcagtgtg gttcccacca taagttatgt
    1601  gtgcttggct tcatactact ttatatatat gttatttagt actttttatt
    1651  taagtaactg tgtatccccg cccattctag tgtggtttcc acctacgtag
    1701  aatgtggcaa caaagactat tgttacgatc tgaggaggtg actctgtggg
    1751  tcgtcaggtt attcaatagt tggcgttaaa aaaaaaaaaa aaaa