Sequence of DPV Chilli veinal mottle virus

Chilli veinal mottle virus isolate Be16 polyprotein gene, partial cds.

ACC No: EF213683

Dated: 2007-11-01 | Length: 1809 | CRC: -1388888968

                
ID   EF213683; SV 1; linear; genomic RNA; STD; VRL; 1809 BP.
XX
AC   EF213683;
XX
DT   01-NOV-2007 (Rel. 93, Created)
DT   01-NOV-2007 (Rel. 93, Last updated, Version 1)
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DE   Chilli veinal mottle virus isolate Be16 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Chilli veinal mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1809
RA   Reddy C.N.L., Devaraju, Madhavi Reddy K., Krishnareddy M.,
RA   Venkataravanappa V., Jalali S., Usha Rani T.R., Raman L., Jalali S.,
RA   Ajith Prasad H.N.;
RT   "Molecular genetic diversity of Chilli veinal mottle virus infecting chilli
RT   pepper in India";
RL   Unpublished.
XX
RN   [2]
RP   1-1809
RA   Reddy C.N.L., Venkataravanappa V., Madhavi Reddy K., Jalali S.,
RA   Krishnareddy M.;
RT   ;
RL   Submitted (29-DEC-2006) to the EMBL/GenBank/DDBJ databases.
RL   Division of Plant Pathology, Indian Institute of Horticultural Research,
RL   Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1809
FT                   /organism="Chilli veinal mottle virus"
FT                   /specific_host="Capsicum annuum"
FT                   /lab_host="Datura metel"
FT                   /isolate="Be16"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Bellary; Karnataka"
FT                   /isolation_source="leaf"
FT                   /virion
FT                   /db_xref="taxon:52280"
FT   CDS             <1. .1494
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="ABQ23265.1"
FT                   /translation="GQPSTVVDNTLMVLVAMRYSLRRLGINYKDQNSRCVFFANGDDLI
FT                   VSVPPSDEWILDSLQEPFSELGLSYDFNERTRDRSELWFMSHQGILIEDQYIPKLEPER
FT                   IVSILEWDRAEQPEHRLEAICASMIEAWGYKELLHEIRLFYKWVIEQAPYSQLVSEGKA
FT                   PYISETALRCLYMSEHGESDISPYLRALIEGAKKEELDDEGGEVTHQSGESVDAGRVKG
FT                   EDSSSRPADKQATEKKNKVSGQAQPQSRQSEMEVPQVRDRDVNVGTSGTFTIPRLKGIS
FT                   SKLTIPRIKTKAVVNLEHLLDYAPEQIHLSNTRALQSQFASWYEGVKNDYDVTDEQMQI
FT                   ILNGLMVWCIENGTSPNINGYWVMMDGDEQVEYPIKPLIDHAKPSFRQIMAHFSNLAEA
FT                   YIEKRNSEKPYMPRYGLQRNLTDMSLARYAFDFYEMTSKTPVRAREAHIQMKAAALRGV
FT                   SNRMFGLDGRVGTQEEDTERHTAEDVNRNMHNLLGFRGL"
FT   mat_peptide     <1. .630
FT                   /product="nuclear inclusion b protein"
FT                   /note="Nib"
FT   mat_peptide     631. .1491
FT                   /product="coat protein"
FT   3'UTR           1495. .1809
XX
SQ   Sequence 1809 BP; 595 A; 326 C; 414 G; 474 T; 0 other;

ef213683 Length: 1809  01-NOV-2007  Type: N  Check: 654  ..

       1  ggacaaccat cgacagtcgt ggataacaca ctcatggtat tagtggcaat
      51  gagatactca ttacgccgac tgggcatcaa ctacaaagat cagaacagca
     101  gatgtgtttt ctttgccaac ggtgatgatt tgatcgtttc agtgccacca
     151  agtgacgagt ggatattgga ttccttgcaa gaaccatttt ctgagttagg
     201  tctttcatat gatttcaatg agcggacaag agatagatca gaactatggt
     251  ttatgtccca tcaaggaata ctaattgagg atcagtatat tccaaaactt
     301  gagcctgagc gtatagtttc aatccttgaa tgggatagag ctgagcaacc
     351  agaacaccga cttgaagcca tttgcgcatc tatgattgaa gcgtggggtt
     401  ataaagaact attacatgag ataaggcttt tctataagtg ggtgattgaa
     451  caagcaccat actcgcagct tgtctctgag gggaaagcac catacatttc
     501  agaaacagca ttgaggtgcc tctacatgag tgaacatgga gaaagtgaca
     551  ttagcccata tctaagagca cttattgaag gagccaagaa ggaagaatta
     601  gatgatgagg gtggagaagt aacccatcag tcgggagaga gtgttgatgc
     651  tggaagagta aaaggcgaag attcatcaag cagaccagct gataaacaag
     701  ccacagagaa gaagaacaag gtgagtggac aagctcagcc acaatctcgt
     751  cagagcgaaa tggaagtacc ccaagttcga gacagagatg ttaatgtcgg
     801  aacctcagga acattcacaa taccgcgtct caagggtatc tcttcaaagt
     851  taacaatacc aaggattaaa acaaaggctg ttgttaatct tgaacacctt
     901  cttgattatg ctcctgaaca aatacatttg agtaacacaa gggcattaca
     951  atcacaattt gcatcttggt atgaaggtgt caaaaatgac tacgatgtca
    1001  cagatgaaca gatgcaaata atattgaatg gattgatggt ttggtgtatt
    1051  gaaaatggaa cgtcaccaaa cattaatggt tattgggtta tgatggatgg
    1101  agatgaacaa gttgaatacc caataaagcc attaattgat catgccaaac
    1151  catcatttag acaaatcatg gcgcatttta gcaatcttgc tgaagcgtac
    1201  attgagaagc gcaactctga gaagccgtat atgccaagat atgggcttca
    1251  aagaaacctt accgatatgt cactagcgcg atatgctttc gatttctatg
    1301  aaatgacatc gaaaactccc gtccgagctc gtgaggcaca cattcaaatg
    1351  aaggctgccg cattacgtgg cgtcagtaac aggatgttcg gactggacgg
    1401  tagggtagga acacaggaag aggacaccga acggcacaca gcggaggatg
    1451  tgaatagaaa catgcataat ctgctgggct ttcgagggtt gtgaacttca
    1501  acttttaact agtaataagt aacatattgt agtatatgta acttggttta
    1551  tgttgttgat catgcatatt cttcagtgtg gttcccacca taagttatgt
    1601  gtgcttggct tcatactact ttatatatat gttatttagt actttttatt
    1651  taggtaactg tgtacccccg cccattttag cgtggttccc cccttaatag
    1701  aatggtgcaa caaagactat tgttatggct taaggaggtg actctgtggg
    1751  tcgttaaact gttcaatagt tggcgttaaa aaaaaaaaaa aaaaaaaaaa
    1801  aaaaaaaaa