Sequence of DPV Chilli veinal mottle virus

Chilli veinal mottle virus isolate S7 polyprotein gene, partial cds.

ACC No: EF213700

Dated: 2007-11-01 | Length: 1798 | CRC: 852130257

                
ID   EF213700; SV 1; linear; genomic RNA; STD; VRL; 1798 BP.
XX
AC   EF213700;
XX
DT   01-NOV-2007 (Rel. 93, Created)
DT   01-NOV-2007 (Rel. 93, Last updated, Version 1)
XX
DE   Chilli veinal mottle virus isolate S7 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Chilli veinal mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1798
RA   Reddy C.N.L., Devaraju, Madhavi Reddy K., Krishnareddy M.,
RA   Venkataravanappa V., Jalali S., Usha Rani T.R., Raman L., Jalali S.,
RA   Ajith Prasad H.N.;
RT   "Molecular genetic diversity of Chilli veinal mottle virus infecting chilli
RT   pepper in India";
RL   Unpublished.
XX
RN   [2]
RP   1-1798
RA   Reddy C.N.L., Venkataravanappa V., Madhavi Reddy K., Salil Jalali,
RA   Krishnareddy M.;
RT   ;
RL   Submitted (09-JAN-2007) to the EMBL/GenBank/DDBJ databases.
RL   Division of Plant Pathology, Indian Institute of Horticultural Research,
RL   Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1798
FT                   /organism="Chilli veinal mottle virus"
FT                   /specific_host="Capsicum annuum"
FT                   /lab_host="Datura metel"
FT                   /isolate="S7"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Sherewad; Maharashtra"
FT                   /isolation_source="leaf"
FT                   /virion
FT                   /db_xref="taxon:52280"
FT   CDS             <1. .1494
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="ABQ23282.1"
FT                   /translation="GQPSTVVDNTLMVLVAMRYSLRRLGINYKDQNSRCVFFANGDDLI
FT                   VSVPPSDEWILDSLQEPFSELGLSYDFGERTKERSELWFMSHQGILIEDQYIPKLEPER
FT                   IVSILEWDRAEHPEHRLEAICASMIEAWGYKELLHEIRLFYRWVIEQAPYSQLVSEGKA
FT                   PYISETALRCLYMSEHGESDISPYLRALIEGAKKEELDDEGGEVTHQSGESVDAGRVKG
FT                   EDSSSKPADKQATEKKNKVSGQAQPQSRQSEMEIPQVRDRDVNVGTSGTFTIPRLKGIS
FT                   SKLTIPKIKTKAVVNLEHLLDYAPEQIHLSNTRALQSQFASWYEGVKNDYDVTDEQMQI
FT                   ILNGLMVWCIENGTSPNINGYWVMMDGEEQVEYPIKPLIDHAKPSFRQIMAHFSNLAEA
FT                   YIEKRNSEKPYMPRYGLQRNLTDMSLARYAFDFYEMTSKTPVRAREAHIQMKAAALRGV
FT                   SNRMFGLDGRVGTQEEDTERHTAEDVNRNMHNLLGVRGL"
FT   mat_peptide     <1. .630
FT                   /product="nuclear inclusion b protein"
FT                   /note="Nib"
FT   mat_peptide     631. .1491
FT                   /product="coat protein"
FT   3'UTR           1495. .1798
XX
SQ   Sequence 1798 BP; 577 A; 335 C; 421 G; 465 T; 0 other;

ef213700 Length: 1798  01-NOV-2007  Type: N  Check: 2840  ..

       1  ggacaaccat cgacagtcgt ggataacaca ctcatggtat tagtggcaat
      51  gagatattca ttacgccgac tgggcatcaa ctacaaagat cagaacagta
     101  gatgtgtttt ctttgccaac ggcgatgatc tgatcgtctc agtaccacca
     151  agtgacgagt ggatattgga ttccttgcaa gaaccattct ctgagttggg
     201  cctgtcatat gattttggcg agcggacaaa agaaagatca gaactctggt
     251  ttatgtccca tcaaggaata ctaattgagg atcagtatat tccaaagctt
     301  gagcctgagc gcatagtttc aatccttgaa tgggatagag ctgagcaccc
     351  agaacaccga cttgaagcca tttgcgcatc tatgattgaa gcatggggtt
     401  acaaagaact attacatgag ataaggcttt tctataggtg ggtgattgag
     451  caagcaccat attcacaact tgtctccgag gggaaggcac catacatttc
     501  ggaaacagca ctgaggtgcc tctacatgag tgaacatgga gaaagtgaca
     551  ttagcccata tcttagagca cttattgaag gagccaagaa ggaagaatta
     601  gatgatgagg gtggagaagt cacccatcag tcgggagaga gtgttgacgc
     651  tggaagagtg aaaggtgaag attcatcaag taaaccagct gataaacaag
     701  ccacagagaa gaagaacaag gtgagtggac aagctcagcc acagtctcgc
     751  cagagtgaaa tggaaatacc ccaagttcga gacagagatg ttaatgtcgg
     801  aacctcagga acattcacaa taccgcgtct caagggcatt tcttcaaagt
     851  taacaatacc aaagatcaaa acgaaggctg ttgttaacct tgaacacctt
     901  cttgattatg cccctgaaca aattcatttg agtaatacaa gggcactaca
     951  atcacaattt gcatcttggt atgaaggtgt taagaatgac tatgatgtca
    1001  cagatgaaca gatgcaaata atattgaatg gattgatggt ttggtgtatt
    1051  gagaatggaa cgtcaccaaa cattaatggt tattgggtta tgatggatgg
    1101  agaagaacaa gttgaatacc caataaagcc attaattgat catgccaaac
    1151  catcatttag acaaatcatg gcgcatttta gcaatcttgc tgaagcgtac
    1201  attgagaagc gcaattctga gaagccttat atgccaagat atgggcttca
    1251  aagaaacctt accgatatgt cattagcgcg atatgctttc gatttctatg
    1301  aaatgacatc gaaaactccc gtccgagctc gtgaggcaca cattcaaatg
    1351  aaagcagccg cattacgtgg cgtcagcaac aggatgttcg gactggacgg
    1401  tagggtagga acacaggaag aggacaccga acggcacaca gcagaggatg
    1451  tgaatagaaa catgcataac ctgctgggcg ttcgagggtt gtgaacttca
    1501  acttttaact ggtaataagt aacatattgt agtatatgta acttggttta
    1551  tgttgttgat catgcatatt cttcagtgtg gttcccacca taagttatgc
    1601  gtgcttggct tcatactact ttatatatat gttatttagt gctttttatt
    1651  taggtaactg tgtacccccg cccattctag cgtggttccc accttaatag
    1701  aatggtgcaa caaagactat tgttatggtt taaggaggtg actctgtggg
    1751  tcgttaagct gttcaatagt tggcgttaaa aaaaaaaaaa aaaaaaaa