Sequence of DPV Chilli veinal mottle virus

Chilli veinal mottle virus isolate L-32 polyprotein gene, partial cds.

ACC No: EF213702

Dated: 2007-11-01 | Length: 1795 | CRC: 755991678

                
ID   EF213702; SV 1; linear; genomic RNA; STD; VRL; 1795 BP.
XX
AC   EF213702;
XX
DT   01-NOV-2007 (Rel. 93, Created)
DT   01-NOV-2007 (Rel. 93, Last updated, Version 1)
XX
DE   Chilli veinal mottle virus isolate L-32 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Chilli veinal mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1795
RA   Reddy C.N.L., Devaraju, Madhavi Reddy K., Krishnareddy M.,
RA   Venkataravanappa V., Jalali S., Usha Rani T.R., Raman L., Jalali S.,
RA   Ajith Prasad H.N.;
RT   "Molecular genetic diversity of Chilli veinal mottle virus infecting chilli
RT   pepper in India";
RL   Unpublished.
XX
RN   [2]
RP   1-1795
RA   Reddy C.N.L., Venkataravanappa V., Madhavi Reddy K., Salil Jalali,
RA   Krishnareddy M.;
RT   ;
RL   Submitted (09-JAN-2007) to the EMBL/GenBank/DDBJ databases.
RL   Division of Plant Pathology, Indian Institute of Horticultural Research,
RL   Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1795
FT                   /organism="Chilli veinal mottle virus"
FT                   /specific_host="Capsicum annuum"
FT                   /lab_host="Datura metel"
FT                   /isolate="L-32"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Lakshmipura; Bangalore; Karnataka"
FT                   /isolation_source="leaf"
FT                   /virion
FT                   /db_xref="taxon:52280"
FT   CDS             <1. .1494
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="ABQ23284.1"
FT                   /translation="GQPSTVVDNTLMVLVAMRYSLRRLGINYKDQNSRCVFFANGDDLI
FT                   VSVPPSDEWILDSLQEPFSELGLSYDFGERTKERSELWFMSHQGILIEDQYIPKLEPER
FT                   IVSILEWDRAEQPEHRLEAICASMIEAWGYKELLHEIRPFYKWVIEQAPYSQLVSEGKA
FT                   PYISETALRCLYMSKHGESDISPYLKALIEGAKKEELDDEGGEVTHQSGESVDAGRVKG
FT                   EDSSSKPADKQATEKKNKVGGQAQPQSRQSEMEVPQVRDRDVNVGTSGTFTIPRLKGIS
FT                   SKLTIPKIKTKAVVNLEHLLDYAPEQIHLSNTRALQSQFASWYEGVKNDYDVTDEQMQI
FT                   ILNGLMVWCIENGTSPNINGYWVMMDGEEQVEYPIKPLIDHAKPSFRQIMAHFSNLAEA
FT                   YIEKRNSEKPYMPRYGLQRNLTDMSLARYAFDFYEMTSKTPVRAREAHIQMKAAALRGV
FT                   SNRMFGLDGRVGTQEEDTERHTAEDVNRNMHNLLGVRGL"
FT   mat_peptide     <1. .630
FT                   /product="nuclear inclusion b protein"
FT                   /note="Nib"
FT   mat_peptide     631. .1491
FT                   /product="coat protein"
FT   3'UTR           1495. .1795
XX
SQ   Sequence 1795 BP; 576 A; 331 C; 419 G; 469 T; 0 other;

ef213702 Length: 1795  01-NOV-2007  Type: N  Check: 6891  ..

       1  ggacaaccat cgacagtcgt ggataacaca ctcatggtat tagtagcaat
      51  gagatattca ttacgccgat tgggcatcaa ctacaaagat cagaacagta
     101  gatgtgtttt ctttgccaac ggcgatgatc tgatcgtctc agtaccacca
     151  agtgacgagt ggatattgga ttccttgcaa gaaccattct ctgagttggg
     201  cctgtcatat gattttggcg agcggacaaa agaaagatca gaactctggt
     251  ttatgtccca tcaaggaata ctaattgagg atcagtatat tccaaagctt
     301  gagcctgagc gcatagtttc aatccttgaa tgggatagag ctgagcaacc
     351  agaacaccgg cttgaagcca tttgcgcatc tatgattgaa gcatggggtt
     401  acaaagaatt gttacatgag ataaggcctt tctataaatg ggtgattgag
     451  caagcaccat attcacaact tgtctctgag gggaaggcac catacatttc
     501  ggaaacagca ctgaggtgcc tctacatgag taaacatgga gaaagtgaca
     551  ttagcccata tcttaaagca cttattgaag gagctaagaa ggaagaatta
     601  gatgatgagg gtggagaagt cacccaccag tcgggagaga gtgttgacgc
     651  tggaagagtg aaaggcgaag attcatcaag taaaccagct gataaacaag
     701  ccacagagaa gaagaacaag gttggtggac aagctcagcc acagtctcgc
     751  cagagtgaaa tggaagtacc ccaagttcga gacagagatg ttaatgtcgg
     801  aacctcagga acattcacaa taccgcgtct caagggtatt tcttcaaagt
     851  taacaatacc aaagatcaaa acgaaggctg ttgttaacct tgaacacctt
     901  cttgattatg cccctgaaca aattcatttg agtaatacaa gggcactaca
     951  atcacaattt gcatcttggt atgaaggtgt taagaatgac tatgatgtca
    1001  cagatgaaca gatgcaaata atattgaatg gattgatggt ttggtgtatt
    1051  gagaatggaa cgtcaccaaa cattaatggt tattgggtta tgatggatgg
    1101  agaagaacaa gttgaatacc caataaagcc attaattgat catgccaaac
    1151  catcatttag acaaatcatg gcgcatttta gcaatcttgc tgaagcgtac
    1201  attgagaagc gcaattctga aaagccttat atgccaagat atgggcttca
    1251  aagaaacctt accgatatgt cattagcgcg gtatgctttc gatttctatg
    1301  aaatgacatc gaaaactccc gtccgagctc gtgaggcaca cattcaaatg
    1351  aaggcagctg cattacgtgg cgtcagcaat aggatgttcg gactggacgg
    1401  tagggtagga acacaggaag aggacaccga acggcacaca gcagaggatg
    1451  tgaatagaaa catgcacaac ctgctgggcg ttcgagggct gtgaacttca
    1501  acttttaact agtagtgagt aacatattgt agtatatgta acttggttta
    1551  tgttgttgat catgcatatt cttcagtgtg gttcccacca taagttatgt
    1601  atgcttggct tcatactact ttatatatat gttatttagt actttttatt
    1651  taggtaactg tgtacccccg cccattctag cgtggttccc accttaatag
    1701  aatggtgcaa caaagactat tgttatggtt taaggaggtg actctgtggg
    1751  tcgttaagct gttcaatagt tggcgttaaa aaaaaaaaaa aaaaa