Sequence of DPV Hardenbergia mosaic virus

Hardenbergia mosaic virus isolate Cgt-1 coat protein gene, partial cds.

ACC No: EF375606

Dated: 2007-09-11 | Length: 822 | CRC: 399728477

                
ID   EF375606; SV 1; linear; genomic RNA; STD; VRL; 822 BP.
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AC   EF375606;
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DT   10-AUG-2007 (Rel. 92, Created)
DT   11-SEP-2007 (Rel. 93, Last updated, Version 3)
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DE   Hardenbergia mosaic virus isolate Cgt-1 coat protein gene, partial cds.
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KW   .
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OS   Hardenbergia mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus; unclassified Potyvirus.
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RN   [1]
RP   1-822
RA   Webster C.G., Coutts B.A., Jones R.A.C., Jones M.G.K., Wylie S.J.;
RT   "Virus impact at the interface of an ancient ecosystem and a recent
RT   agroecosystem: studies on three legume-infecting potyviruses in the
RT   southwest Australian floristic region";
RL   Plant Pathol. 56(5):729-742(2007).
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RN   [2]
RP   1-822
RA   Webster C., Wylie S., Coutts B., Jones M., Jones R.;
RT   ;
RL   Submitted (21-JAN-2007) to the EMBL/GenBank/DDBJ databases.
RL   WA State Agricultural Biotechnology Centre, Murdoch University, South
RL   Street, Perth, WA 6150, Australia
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FH   Key             Location/Qualifiers
FH
FT   source          1. .822
FT                   /organism="Hardenbergia mosaic virus"
FT                   /specific_host="Hardenbergia violacea"
FT                   /isolate="Cgt-1; Cannington-1"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /db_xref="taxon:409486"
FT   CDS             <1. .>822
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="capsid protein"
FT                   /protein_id="ABR14690.1"
FT                   /translation="SDTDATKNMDAGLDGKKDKKTVSGGDKDKGKGSASTAKDKDVDAG
FT                   SQGNVVPRLQKITKKMNLPMVKGNMILNLEHLIEYKPEQTKLFNTRATDAQFATWFQAV
FT                   QEEYELDDAQMGIVMNGFMVWCIDNGTSPDVNGVWVMMDGDEQVEYPLKPMVENAKPTL
FT                   RQIMHHFSDAAEAYIEMRCSTGPYMPRYGLLRNLRDRSLARYAFDFYEVNAKTAVRARE
FT                   AVAQMKAAALSNVNTKLFGLDGNVATTSENTERHTAKDVNQNMHSCWNESSQ"
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SQ   Sequence 822 BP; 260 A; 147 C; 220 G; 195 T; 0 other;

ef375606 Length: 822  11-SEP-2007  Type: N  Check: 6431  ..

       1  tcagacacag atgccaccaa aaacatggat gctggattgg atggcaagaa
      51  agacaagaag acagttagtg gaggtgataa ggacaaaggc aagggaagcg
     101  cttctacagc aaaggataaa gatgtagatg ctggctcaca agggaatgtt
     151  gtgccgcgtc ttcaaaagat aacaaagaag atgaacctcc ctatggtgaa
     201  gggcaatatg attttgaatc tagaacattt gattgaatac aagcctgagc
     251  agactaaact cttcaataca agggcaactg atgcccagtt tgccacatgg
     301  ttccaggctg ttcaagaaga gtatgaactt gatgatgctc aaatgggcat
     351  tgtcatgaat ggttttatgg tgtggtgtat tgacaatggc acctcacctg
     401  atgttaatgg agtgtgggtg atgatggatg gtgatgaaca agtagaatat
     451  ccattgaaac cgatggtgga gaatgcaaaa cccactctta gacagataat
     501  gcaccatttt tctgacgcag ctgaagcgta catcgaaatg aggtgctcaa
     551  ctggaccgta catgcctagg tatggtctgc tgcgcaattt gagagacaga
     601  agtctggcac gctatgcttt tgacttttat gaagtgaatg caaagacagc
     651  ggtgcgtgct agagaagcag tagcgcagat gaaagctgca gctctcagta
     701  atgttaacac taagttgttt ggcttggatg gtaacgttgc aacaaccagc
     751  gagaacactg aaaggcacac tgcgaaggat gtgaaccaga acatgcattc
     801  ttgttggaat gagtcatcgc ag