Sequence of DPV Hardenbergia mosaic virus

Hardenbergia mosaic virus isolate Can1-2 coat protein gene, partial cds.

ACC No: EF375608

Dated: 2007-09-11 | Length: 822 | CRC: -218930944

                
ID   EF375608; SV 1; linear; genomic RNA; STD; VRL; 822 BP.
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AC   EF375608;
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DT   10-AUG-2007 (Rel. 92, Created)
DT   11-SEP-2007 (Rel. 93, Last updated, Version 3)
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DE   Hardenbergia mosaic virus isolate Can1-2 coat protein gene, partial cds.
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KW   .
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OS   Hardenbergia mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus; unclassified Potyvirus.
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RN   [1]
RP   1-822
RA   Webster C.G., Coutts B.A., Jones R.A.C., Jones M.G.K., Wylie S.J.;
RT   "Virus impact at the interface of an ancient ecosystem and a recent
RT   agroecosystem: studies on three legume-infecting potyviruses in the
RT   southwest Australian floristic region";
RL   Plant Pathol. 56(5):729-742(2007).
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RN   [2]
RP   1-822
RA   Webster C., Wylie S., Coutts B., Jones M., Jones R.;
RT   ;
RL   Submitted (21-JAN-2007) to the EMBL/GenBank/DDBJ databases.
RL   WA State Agricultural Biotechnology Centre, Murdoch University, South
RL   Street, Perth, WA 6150, Australia
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FH   Key             Location/Qualifiers
FH
FT   source          1. .822
FT                   /organism="Hardenbergia mosaic virus"
FT                   /specific_host="Hardenbergia comptoniana"
FT                   /isolate="Can1-2; Canberra1-2"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /db_xref="taxon:409486"
FT   CDS             <1. .>822
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="capsid protein"
FT                   /protein_id="ABR14692.1"
FT                   /translation="SETDANKNMDAGLDSKKDKKTTGGGDKDKGKGSTSAAKDKDVDVG
FT                   SQGKVVPRLQKITKKMNLPMVKGNMILNLDHLIEYKPEQTKLFNTRATDAQFATWFQAV
FT                   KEEYELDDAQMGIVMNGFMVWCIDNGTSPDVNGVWVMMDGDEQVEYPLKPMVENAKPTL
FT                   RQIMHHFSDAAEAYIEMRCSTGPYMPRYGLLRNLRDRSLARYAFDFYEVNAKTAVRARE
FT                   AVAQMKAAALSNVNTKLFGLDGNVATTSENTERHTAKDVNENMHSLLGMGSV"
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SQ   Sequence 822 BP; 271 A; 151 C; 216 G; 184 T; 0 other;

ef375608 Length: 822  11-SEP-2007  Type: N  Check: 8497  ..

       1  tcagaaacag atgccaataa gaatatggat gctggactgg acagcaagaa
      51  agacaagaag acaactggtg ggggtgataa agacaaaggc aagggaagca
     101  cctctgcagc aaaagacaag gatgtagatg ttggttcgca agggaaggtc
     151  gtgccacgtc tccagaaaat aacaaagaaa atgaaccttc ccatggtgaa
     201  aggcaatatg atcctgaact tggatcattt gattgaatac aaacctgaac
     251  aaaccaagct ctttaacaca agggcaactg atgcccaatt tgctacgtgg
     301  tttcaagctg tgaaagaaga gtatgaactt gatgatgctc aaatgggcat
     351  tgttatgaat ggttttatgg tgtggtgcat tgacaatggc acttcacctg
     401  atgtgaatgg agtgtgggtg atgatggatg gtgatgagca agtggaatat
     451  ccactgaaac caatggtaga aaatgcaaaa cccaccttga gacaaataat
     501  gcaccatttc tctgacgcag ctgaagcgta cattgagatg aggtgctcaa
     551  caggaccata catgcctagg tatggcctac tgcgcaattt gagagatagg
     601  agtctggcgc gctatgcttt tgacttttat gaagttaatg caaagacagc
     651  agtacgtgct agagaagcag tagcgcagat gaaagctgca gctctcagca
     701  acgtcaacac taagttgttt ggcttggacg gaaacgttgc aacaaccagc
     751  gagaacactg aaaggcacac tgcaaaggat gtaaatgaga acatgcattc
     801  ccttttaggg atgggctcag tg