Sequence of DPV Potato virus Y
Potato virus Y isolate SD2 NIb protein gene, partial cds.
ACC No: EF470239
Dated: 2007-04-06 | Length: 1557 | CRC: -982269668
ID EF470239; SV 1; linear; genomic RNA; STD; VRL; 1557 BP.
XX
AC EF470239;
XX
DT 06-APR-2007 (Rel. 91, Created)
DT 06-APR-2007 (Rel. 91, Last updated, Version 1)
XX
DE Potato virus Y isolate SD2 NIb protein gene, partial cds.
XX
KW .
XX
OS Potato virus Y
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RP 1-1557
RA Zhu C., Wen F., Song Y.;
RT "Cloning of the NIb gene of the PVY";
RL Unpublished.
XX
RN [2]
RP 1-1557
RA Zhu C., Wen F., Song Y.;
RT ;
RL Submitted (05-MAR-2007) to the EMBL/GenBank/DDBJ databases.
RL Shandong Agricultural University, College of Life Science, Daizong Street
RL No.61, Taian, Shandong 271018, China
XX
FH Key Location/Qualifiers
FH
FT source 1. .1557
FT /organism="Potato virus Y"
FT /specific_host="tobacco"
FT /strain="N"
FT /isolate="SD2"
FT /mol_type="genomic RNA"
FT /country="China"
FT /db_xref="taxon:12216"
FT CDS <1. .>1557
FT /codon_start=1
FT /product="NIb protein"
FT /protein_id="ABO69737.1"
FT /translation="AKHSAWMHEALTGNLQAVATMKSQLVTKHVVKGECRHFKEFLTVD
FT AEAEAFFRPLMDAYGKSLLNRDAYIKDIMKYSKPIDVGIVDCDAFEEAINRVIIYLQVH
FT GFKKCAYVTDEQEIFKALNMKAAVGAMYGGKKKDYFEHFTNADKEEIVMQSCLRLYKGL
FT LGIWNGSLKAELRCKEKILANKTRTFTAAPLDTLLGGKVCVDDFNNQFYSKNIECCWTV
FT GMTKFYGGWDKLLRRLPENWVYCDADGSQFDSSLTPYLINAVLIIRSTYMEDWDVGLQM
FT LRNLYTEIIYTPISTPDGTIVKKFRGNNSGQPSTVVDNSLMVVLAMHYALIKECIEFEE
FT IDSTCVFFVNGDDLLIAVNPDKEGILDRLSKHFSDLGLNYDFSSRTRNKEELWFMSHRG
FT LLIEGMYVPKLEEEGIVSILQWDRADLAEHRLEAICAAMIESWGYSELTHQIRRFYSWL
FT LQQQPFATIAQEGKAPYIASMALRKLYMDRAVDEEELRAFTEMMVALDDEFEFDSYEVH
FT HQ"
XX
SQ Sequence 1557 BP; 471 A; 275 C; 387 G; 424 T; 0 other;
ef470239 Length: 1557 06-APR-2007 Type: N Check: 7984 ..
1 gctaagcatt ctgcatggat gcatgaggcc ttgacaggaa atttgcaagc
51 tgtcgcaaca atgaaaagtc aactagtaac caagcatgta gttaaaggag
101 agtgtcgaca cttcaaagaa ttcctgactg tggatgcaga agcagaggca
151 ttcttcaggc ctttgatgga tgcgtatggg aaaagcttgc taaatagaga
201 tgcgtacatc aaggacatta tgaagtactc aaagcctata gatgttggta
251 tcgtagactg tgatgcattt gaagaagcca ttaatagggt tatcatctac
301 ctgcaagtac acggcttcaa gaagtgtgca tatgtcactg acgagcaaga
351 aattttcaaa gcgctcaaca tgaaagctgc agtcggagcc atgtatggtg
401 gcaaaaagaa agactatttt gagcatttca ctaatgcaga taaggaagaa
451 atagtcatgc aaagctgttt gcgattgtat aaaggcttgc tcggcatttg
501 gaacggatca ttgaaggcag agctccggtg taaggagaag atacttgcaa
551 ataagacgag gacattcact gctgcacctc tagatacctt gctgggtggt
601 aaagtgtgtg ttgatgactt caataatcaa ttttactcaa agaatattga
651 atgctgttgg acagttggga tgactaagtt ttatggtggt tgggataaac
701 tgcttcggcg tttacctgag aattgggtat actgtgatgc tgatggctca
751 caatttgata gttcactaac tccatactta atcaatgctg ttctcatcat
801 cagaagcaca tacatggaag actgggatgt ggggttgcaa atgctgcgca
851 atttgtacac tgagattatt tacacaccaa tttcaactcc agatggaaca
901 attgttaaga agttcagagg gaataacagt ggtcagcctt ctactgttgt
951 ggacaactct cttatggtcg tcctcgccat gcactatgct ctcatcaaag
1001 aatgcattga gtttgaagag attgacagca cgtgtgtgtt ctttgtcaat
1051 ggtgatgatc tgctgattgc tgtgaatccg gataaagagg gtattcttga
1101 cagattgtca aaacacttct cagatcttgg tttaaattat gatttctcgt
1151 caagaacaag aaataaggaa gagttgtggt ttatgtctca tagaggccta
1201 ctgatcgagg gcatgtacgt gccgaaactt gaagaagaag ggatcgtgtc
1251 cattctccaa tgggacagag cagacttggc tgaacacagg cttgaggcga
1301 tctgcgcagc tatgatagag tcctggggtt attctgaact aacgcaccaa
1351 atcaggagat tctactcatg gttattgcaa cagcaacctt ttgcaacaat
1401 agcgcaggaa gggaaggctc cttatatagc aagcatggca ttaaggaaac
1451 tgtatatgga tagggctgtg gatgaggaag agctaagagc cttcactgaa
1501 atgatggtcg cattagatga tgaattcgag ttcgactctt atgaagtaca
1551 ccatcaa