Sequence of DPV Potato virus Y
Potato virus Y isolate SD4 NIb protein gene, partial cds.
ACC No: EF470241
Dated: 2007-04-06 | Length: 1557 | CRC: -712242614
ID EF470241; SV 1; linear; genomic RNA; STD; VRL; 1557 BP.
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AC EF470241;
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DT 06-APR-2007 (Rel. 91, Created)
DT 06-APR-2007 (Rel. 91, Last updated, Version 1)
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DE Potato virus Y isolate SD4 NIb protein gene, partial cds.
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KW .
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OS Potato virus Y
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
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RN [1]
RP 1-1557
RA Zhu C., Wen F., Song Y.;
RT "Cloning of the NIb gene of the PVY";
RL Unpublished.
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RN [2]
RP 1-1557
RA Zhu C., Wen F., Song Y.;
RT ;
RL Submitted (05-MAR-2007) to the EMBL/GenBank/DDBJ databases.
RL Shandong Agricultural University, College of Life Science, Daizong Street
RL No.61, Taian, Shandong 271018, China
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FH Key Location/Qualifiers
FH
FT source 1. .1557
FT /organism="Potato virus Y"
FT /specific_host="tobacco"
FT /strain="O"
FT /isolate="SD4"
FT /mol_type="genomic RNA"
FT /country="China"
FT /db_xref="taxon:12216"
FT CDS <1. .>1557
FT /codon_start=1
FT /product="NIb protein"
FT /protein_id="ABO69739.1"
FT /translation="AKHSAWMYEALTGNLQAVATMKSQLVTKHVVKGECRHFKEFLTVD
FT SEAEAFFRPLMDAYGKSLLNREAYIKDIMKYSKPIDVGIVDCDAFEEAINRVIIYLQVH
FT GFQKCNYITDEQEIFKALNMKAAVGAMYGGKKKDYFEHFTEADKEEIVMQSCFRLYKGS
FT LGIWNGSLKAELRCKEKILANKTRTFTAAPLDALLGGKVCVDDFNNQFYSKNIECCWTV
FT GMTKFYGGWDKLLRRLPENWVYCDADGSQFDSSLTPYLINAVLIIRSTYMEDWDLGLQM
FT LRNLYTEIIYTPISTPDGTIVKKFRGNNSGQPSTVVDNSLMVVLAMHYALIKECVEFEE
FT IDSTCVFFVNGDDLLIAVNPEKESILDRMSQHFSDLGLNYDFSSRTRRKEELWFMSHRG
FT LLIEGMYVPKLEEERIVSILQWDRADLPEHRLEAICAAMIESWGYFELTHQIRRFYSWL
FT LQQQPFSTIAQEGRAPYIASMALKKLYMDRTVDEEELKAFTEMMVALDDEFECDTYEVH
FT HQ"
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SQ Sequence 1557 BP; 475 A; 261 C; 389 G; 432 T; 0 other;
ef470241 Length: 1557 06-APR-2007 Type: N Check: 5549 ..
1 gctaagcatt ctgcatggat gtatgaggct ctaacaggga atttgcaagc
51 tgtggcgaca atgaagagtc agctagtgac aaagcacgtg gtcaaagggg
101 agtgtcggca cttcaaagag ttcttaactg tggattcgga agcagaagct
151 ttcttcaggc ctttgatgga tgcttatggg aagagcttat taaatagaga
201 agcatatata aaggacataa tgaaatactc aaagcctatt gatgttggaa
251 tagtagactg tgatgctttt gaagaggcta tcaatagggt tatcatttat
301 ctgcaagtgc atggcttcca gaaatgcaat tacatcaccg atgagcagga
351 aattttcaaa gctctcaata tgaaagctgc tgtcggagct atgtatggag
401 gcaagaagaa agactacttc gagcatttta ctgaggcgga taaagaggaa
451 attgttatgc aaagttgctt tcgattgtac aagggctcgc ttggcatatg
501 gaatggatca ttgaaagcag aacttcggtg caaagagaag atacttgcaa
551 ataagacaag gacattcact gctgcacctt tagatgcttt attgggtgga
601 aaggtgtgcg ttgatgattt taataatcaa ttctactcaa agaacattga
651 atgctgctgg actgttggaa tgactaagtt ttatggaggt tgggacaaat
701 tgcttcggcg tctacctgaa aattgggtgt actgcgatgc cgatggttca
751 caattcgata gttcactcac cccataccta attaatgctg ttctcatcat
801 cagaagcaca tacatggaag attgggacct ggggttgcaa atgttgcgca
851 atttgtacac agaaataatt tacacaccaa tctcaactcc agatggaaca
901 attgtcaaga agtttagagg taataatagc ggtcaacctt ctaccgttgt
951 ggataattct ctcatggttg tccttgctat gcattacgct ctcattaagg
1001 agtgtgtcga gtttgaagaa atcgacagca cgtgtgtatt ctttgttaat
1051 ggtgatgact tattgattgc tgtgaatccg gagaaagaga gcattctcga
1101 tagaatgtca caacatttct cagatcttgg tttgaactat gatttttcgt
1151 cgagaacaag aaggaaggag gaattgtggt tcatgtccca tagaggcctg
1201 ctaatcgagg gtatgtacgt gccaaagctt gaagaagaga gaattgtatc
1251 cattctgcaa tgggatagag ctgatctgcc agagcacaga ttagaagcga
1301 tctgtgcagc aatgatagaa tcctggggtt attttgagtt aacgcaccaa
1351 atcaggagat tctactcatg gttgttgcaa cagcaacctt tttcaacgat
1401 agcacaggaa ggaagagctc catacatagc gagcatggca ttgaagaagc
1451 tgtacatgga taggacagta gatgaggagg aactgaaggc tttcactgaa
1501 atgatggttg ccttggatga tgaatttgag tgcgatactt atgaagtaca
1551 ccatcaa