Sequence of DPV Sweet potato feathery mottle virus

Sweet potato feathery mottle virus isolate CY1 polyprotein gene, partial cds.

ACC No: EF492048

Dated: 2007-04-23 | Length: 1249 | CRC: 1166092685

                
ID   EF492048; SV 1; linear; genomic RNA; STD; VRL; 1249 BP.
XX
AC   EF492048;
XX
DT   23-APR-2007 (Rel. 91, Created)
DT   23-APR-2007 (Rel. 91, Last updated, Version 1)
XX
DE   Sweet potato feathery mottle virus isolate CY1 polyprotein gene, partial
DE   cds.
XX
KW   .
XX
OS   Sweet potato feathery mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1249
RA   Wang L.-Y., Shen T.-H., Chen K.-C., Chen T.-C., Yeh S.-D.;
RT   ;
RL   Submitted (13-MAR-2007) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, National Chung Hsing University, 250 Kuo Kuang Road,
RL   Taichung 402, Taiwan
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1249
FT                   /organism="Sweet potato feathery mottle virus"
FT                   /specific_host="Ipomoea batatas (L.) Lam."
FT                   /isolate="CY1"
FT                   /mol_type="genomic RNA"
FT                   /country="Taiwan"
FT                   /db_xref="taxon:12844"
FT   CDS             <1. .1027
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /protein_id="ABP48113.1"
FT                   /translation="DLSEYTRVLNEMYDDSLLQDNDLMVYHQSDNPPEFKDAGVNPPAT
FT                   KAKRTIHTPEITEITEPEDPKQAALREARQKQPAVTPESYGRDTGEKPMPSVSPQRVKD
FT                   KDVNVGTTGTFLVPRVKLHTSKMRQPRVNGISVVNLQHLATYEPEQHNIGNTRSTQEQF
FT                   QAWYEGVKGDYGVDDAGMAILLNGLMVWCIENGTSPNINGVWTMMDGDEQVTYPIKPLL
FT                   DHAVPTFRQIMTHFSDVAEAYIEMRNRTKAYMPRYGFQRNLTDMSLARYAFDFYELHST
FT                   TPTRAKDAHMQMKAAALKNAHNRLFGLDGNVSTQEEDTERHTATDVTRNIHNLLGMRGV
FT                   H"
FT   mat_peptide     86. .1024
FT                   /product="coat protein"
XX
SQ   Sequence 1249 BP; 382 A; 254 C; 292 G; 321 T; 0 other;

ef492048 Length: 1249  23-APR-2007  Type: N  Check: 977  ..

       1  cgatctcagc gagtacacgc gtgtccttaa cgagatgtat gatgatagcc
      51  tccttcaaga taatgattta atggtgtatc atcaatctga taacccccct
     101  gaatttaaag atgcaggtgt gaacccacca gccaccaaag ccaaaaggac
     151  catacacaca ccagaaatca cagaaattac tgagcccgag gatcccaaac
     201  aagctgcgct tcgcgaagct agacagaaac aacctgctgt aacacccgaa
     251  tcatacggta gagatacagg tgagaagcct atgccctctg tttcaccaca
     301  aagggtgaaa gacaaggatg tcaatgttgg tacgacaggt acatttttag
     351  taccgcgagt taagcttcat actagtaaaa tgcgccaacc cagagtcaat
     401  ggaatctctg tagtaaactt acaacacctt gcaacctatg aacctgagca
     451  acataacatt gggaatacac gctcaactca ggaacagttt caagcatggt
     501  atgaaggtgt caagggtgat tatggtgttg atgacgctgg aatggcaatc
     551  ttgttgaatg gattgatggt atggtgcata gagaatggaa catctccaaa
     601  tataaatggc gtttggacga tgatggatgg ggatgaacaa gtgacgtacc
     651  ccataaagcc attactggat catgcagtgc ctacttttag gcaaatcatg
     701  acacacttca gtgacgttgc tgaagcgtat atagaaatga ggaatcgcac
     751  caaggcatat atgcctaggt atggattcca acgtaatttg actgatatga
     801  gtcttgcgcg atatgcattt gatttctatg agctgcactc aacaacacct
     851  acacgtgcta aagatgcaca catgcagatg aaagcagctg cacttaagaa
     901  tgcgcataat cggttgtttg gtttggatgg aaacgtctcc acgcaagagg
     951  aggatacgga gaggcacact gcgactgatg ttactagaaa tatacataac
    1001  ctcttaggaa tgaggggtgt gcactaggtg aaactttgca ctgtatttat
    1051  tacttatgtg gtttttagta tgcctttaat taaattcgtg ttcttcagtc
    1101  ccgacagaaa tggttgggtg tatcgacaga gtgggcttct agcttggtcc
    1151  atacacctga gaagtttctg gtctattacg tatcataagg gactcttaaa
    1201  agtgaggagt acctcgtaag aaaagccttt ttggttcgtg ttcgagccc