Sequence of DPV Torque teno mini virus 10
TTV-like mini virus isolate LIL-y1 ORF2, ORF1, ORF3, and ORF4 genes, complete cds.
ACC No: EF538880
Dated: 2007-09-23 | Length: 2887 | CRC: 981946176
ID EF538880; SV 1; linear; genomic DNA; STD; VRL; 2887 BP.
XX
AC EF538880;
XX
DT 23-SEP-2007 (Rel. 93, Created)
DT 23-SEP-2007 (Rel. 93, Last updated, Version 1)
XX
DE TTV-like mini virus isolate LIL-y1 ORF2, ORF1, ORF3, and ORF4 genes,
DE complete cds.
XX
KW .
XX
OS TTV-like mini virus
OC Viruses; ssDNA viruses; Anelloviridae; unclassified Anelloviridae.
XX
RN [1]
RP 1-2887
RX DOI; 10.1099/vir.0.83071-0.
RX PUBMED; 17872521.
RA Biagini P., Uch R., Belhouchet M., Attoui H., Cantaloube J.F.,
RA Brisbarre N., de Micco P.;
RT "Circular genomes related to anelloviruses identified in human and animal
RT samples by using a combined rolling-circle
RT amplification/sequence-independent single primer amplification approach";
RL J. Gen. Virol. 88(Pt 10):2696-2701(2007).
XX
RN [2]
RP 1-2887
RA Biagini P., Belhouchet M., de Micco P.;
RT ;
RL Submitted (05-APR-2007) to the EMBL/GenBank/DDBJ databases.
RL Service de Virologie Moleculaire, EFS Alpes-Mediterranee, 149, Bd. Baille,
RL Marseille 13005, France
XX
FH Key Location/Qualifiers
FH
FT source 1. .2887
FT /organism="TTV-like mini virus"
FT /host="Homo sapiens"
FT /isolate="LIL-y1"
FT /mol_type="genomic DNA"
FT /country="France"
FT /isolation_source="plasma"
FT /db_xref="taxon:93678"
FT CDS 188. .511
FT /codon_start=1
FT /product="ORF2"
FT /db_xref="InterPro:IPR004118"
FT /db_xref="UniProtKB/TrEMBL:A8DMQ4"
FT /protein_id="ABU55888.1"
FT /translation="MSKQLQNPVYYGKALESQWRNNIFNSHDLMCGCKDPVLHLLIILN
FT REGNAPKPEEDVKNIKCLITGEGAKDGEKDIIPDDFEPGELDRLFSELGETEEEDENPT
FT DDG"
FT CDS 370. .2322
FT /codon_start=1
FT /product="ORF1"
FT /db_xref="InterPro:IPR004219"
FT /db_xref="UniProtKB/TrEMBL:A8DMQ5"
FT /protein_id="ABU55889.1"
FT /translation="MPYYWRRRQRWRKRYYPRRFRTWRTRPTVFRTWRNRRRRRKPYRR
FT RVRKRLFKRKLQAIKLKEFQPDVIRRCTIFGNICLFQGSPERTNHNYVQYIYSYVPVNG
FT PGGGGWTLMIESLSSLWEDRQHLKNVWTTSNAGLPLVRYRGATLTFFQSPYTDYIVKVH
FT RCYPMTDTKYTHADSAPSRMLLKRKTIKVPSLETRKKRGPYKKVKIPPPAQMQNKWYFQ
FT KDICDIPLLMIQATAVGFRYPFAPSSAQSNNVTLLCLNICLFQNSNFDNPSPTQGYFPK
FT PGTYLYSTNSRSVSTPSQLSFNTLIYLGNTKDYTLGKNSEETFAEWGNPFMPEYIHGER
FT PVFTNQVKVNKSNFESQKENFHLLEEDYFFWVRYNPEKDTGDSNTVFLQNNYLQTSWHR
FT PDNPNLIMEGFPLYDMLWGFTDWERKLHDTQDIDNKYIVVIQTQQFDDKKGYYVLIDPH
FT FKDGKNPYDTPLTNYNKSHWNISSRIQEKPINDICLSGPGSPKPPYGNYMQAKMHYKFH
FT FNWGGCPKTLEKPYDPCSQPTWNIPRNLHEGVQIQNPETEPQTELQKWDWRRDYITPKA
FT IERISSYTPIDEDVQIFTGTKRDVPICRQTPPEDTSSEEEKEETPPTQEQINKLKRKQH
FT KLKLRILKRLKTTNI"
FT CDS 1961. .2305
FT /codon_start=1
FT /product="ORF3"
FT /db_xref="InterPro:IPR008474"
FT /db_xref="UniProtKB/TrEMBL:A8DMQ6"
FT /protein_id="ABU55890.1"
FT /translation="MILVHSLPGIFPVTSMKEYKYRIQKQNHKQNSKNGTGEGTTLHPK
FT LSKELVATRQLMKMYKFLQEPKETCQYADKHHQRTRARKRKKRRHHRPRSKSTSSNESN
FT TNSSSESSSD"
FT CDS 2175. .2528
FT /codon_start=1
FT /product="ORF4"
FT /db_xref="UniProtKB/TrEMBL:A8DMQ7"
FT /protein_id="ABU55891.1"
FT /translation="MPTNTTRGHELGRGKRGDTTDPGANQQAQTKATQTQAPNPQATEN
FT NKYLIKHCKNKVQLFPTTHPFKNRRFTPAERQTEKELSKIFLRPERTFFYDTPFYPWLP
FT WEPLVNFDMGNKF"
XX
SQ Sequence 2887 BP; 1121 A; 641 C; 483 G; 642 T; 0 other;
ef538880 Length: 2887 23-SEP-2007 Type: N Check: 3836 ..
1 atataaccaa gtacacttcc gaatggctga gtttatgccg ccagacggag
51 acggcaaagc atcagcaaca gccggctgat cttgggcggg agccgaaggt
101 gagtgaaacc accgtagtct aggggcaatt cgggctagat cagtctggcg
151 gaacgggcaa gaaacttaaa atatatttgt tttttagatg agcaaacagc
201 tacaaaatcc agtatactac ggaaaagcat tagaatctca atggagaaac
251 aacattttta actcccacga cttgatgtgc ggctgcaaag atccagtact
301 acatttatta attattctaa acagagaagg aaacgcacca aaacctgaag
351 aagacgttaa aaacataaaa tgccttatta ctggagaagg cgccaaagat
401 ggagaaaaag atattatccc agacgatttc gaacctggag aactagaccg
451 actgttttca gaacttggag aaacagaaga agaagacgaa aaccctaccg
501 acgacgggta agaaaaagac tttttaaacg taaattacaa gctataaaac
551 ttaaagaatt tcagcctgat gttataagac gctgtactat ttttggcaac
601 atttgtttat ttcaaggaag tccagaaaga acaaatcata actatgtaca
651 atatatatat agctatgtac cagttaatgg acccggaggg ggcggatgga
701 cattaatgat agaaagctta tcttctttat gggaagaccg gcaacattta
751 aagaatgtgt ggactactag taatgctgga ctaccactag taagatacag
801 aggagcaaca ctcacatttt ttcaatcacc atacacagac tatatagtaa
851 aagtacacag atgctatcca atgacagaca caaaatacac acatgcagac
901 tccgcaccaa gtagaatgct attaaaaaga aaaaccataa aagtacctag
951 tttagaaacc agaaaaaaaa gaggaccata taaaaaagtt aaaataccac
1001 caccagcaca aatgcaaaac aaatggtact tccaaaaaga catttgtgac
1051 attccacttc ttatgataca agctacagca gtaggcttta gatatccatt
1101 tgcacctagt agtgcacaaa gtaacaatgt aactttacta tgcctaaaca
1151 tatgtttatt tcaaaattct aactttgata acccttctcc aacacaagga
1201 tactttccaa aaccaggaac atacctatac agcacaaaca gcagatcagt
1251 atctacacca tcacaattat cctttaatac tttaatttac ctaggtaata
1301 ccaaagacta cactctaggt aaaaactcag aagaaacatt tgcagaatgg
1351 ggaaatccct ttatgccaga atacatacac ggagaaagac ctgtttttac
1401 taaccaagta aaagtaaata aaagtaactt tgaaagtcaa aaagagaact
1451 ttcacttatt agaagaagac tacttctttt gggtacgcta taacccagaa
1501 aaagacacag gcgacagtaa cacagtattt ttacaaaaca actatctaca
1551 aacaagctgg cacagaccag acaatcccaa cttaataatg gaaggctttc
1601 cattatatga catgctatgg ggatttacag actgggaaag aaaactacat
1651 gacacacagg acatagacaa caaatacata gtagttatac aaacacagca
1701 atttgacgat aaaaaaggct attatgtact catagatcca cactttaaag
1751 acggaaaaaa cccatatgac acaccactta caaactacaa caaatctcac
1801 tggaatataa gcagtagaat acaagaaaaa ccaataaacg acatttgctt
1851 atcaggaccc ggaagtccta aaccacctta tggaaactat atgcaagcta
1901 aaatgcatta taaatttcac tttaactggg gaggctgtcc aaaaacttta
1951 gaaaaaccat atgatccttg ttcacagcct acctggaata ttccccgtaa
2001 cctccatgaa ggagtacaaa tacagaatcc agaaacagaa ccacaaacag
2051 aactccaaaa atgggactgg agaagggact acattacacc caaagctatc
2101 gaaagaatta gtagctacac gccaattgat gaagatgtac aaatttttac
2151 aggaaccaaa agagacgtgc caatatgccg acaaacacca ccagaggaca
2201 cgagctcgga agaggaaaaa gaggagacac caccgaccca ggagcaaatc
2251 aacaagctca aacgaaagca acacaaactc aagctccgaa tcctcaagcg
2301 actgaaaaca acaaatattt aattaaacac tgtaaaaaca aagtacagtt
2351 atttcctact actcatccct ttaaaaatag gagatttaca ccagctgaaa
2401 gacaaacaga aaaagaacta agtaaaatat tccttagacc agaaagaacc
2451 ttcttttatg atactccctt ttatccctgg cttccctggg aaccgcttgt
2501 aaactttgat atgggtaata aattttaagg ccaacaaatt tcacttggtg
2551 gagtccattt atttaagttt aaccttaata aacagacacc gcctcccaat
2601 gaataaggcg ccaaaagggg gctccgcccc cttacacccc caagggggct
2651 ccgcccccta aaacccccaa gggggctccg cccccttaca cccccaaggg
2701 ggctccgccc cctaaccccc ggaaaaccac ctaatttaca tggctcacca
2751 caaactgcta aacggaaacc acaaaatttg cattgccgac cacaaacgaa
2801 tatgcaaata caagttcctc aacctacctt taacttccct aaaaattaat
2851 taataatcac cgtcaattta cgtcactgaa acaaact