Sequence of DPV Torque teno mini virus 11
TTV-like mini virus isolate LIL-y2 ORF2, ORF1, and ORF3 genes, complete cds.
ACC No: EF538881
Dated: 2007-09-23 | Length: 2871 | CRC: -361885505
ID EF538881; SV 1; linear; genomic DNA; STD; VRL; 2871 BP.
XX
AC EF538881;
XX
DT 23-SEP-2007 (Rel. 93, Created)
DT 23-SEP-2007 (Rel. 93, Last updated, Version 1)
XX
DE TTV-like mini virus isolate LIL-y2 ORF2, ORF1, and ORF3 genes, complete
DE cds.
XX
KW .
XX
OS TTV-like mini virus
OC Viruses; ssDNA viruses; Anelloviridae; unclassified Anelloviridae.
XX
RN [1]
RP 1-2871
RX DOI; 10.1099/vir.0.83071-0.
RX PUBMED; 17872521.
RA Biagini P., Uch R., Belhouchet M., Attoui H., Cantaloube J.F.,
RA Brisbarre N., de Micco P.;
RT "Circular genomes related to anelloviruses identified in human and animal
RT samples by using a combined rolling-circle
RT amplification/sequence-independent single primer amplification approach";
RL J. Gen. Virol. 88(Pt 10):2696-2701(2007).
XX
RN [2]
RP 1-2871
RA Biagini P., Belhouchet M., de Micco P.;
RT ;
RL Submitted (05-APR-2007) to the EMBL/GenBank/DDBJ databases.
RL Service de Virologie Moleculaire, EFS Alpes-Mediterranee, 149, Bd. Baille,
RL Marseille 13005, France
XX
FH Key Location/Qualifiers
FH
FT source 1. .2871
FT /organism="TTV-like mini virus"
FT /host="Homo sapiens"
FT /isolate="LIL-y2"
FT /mol_type="genomic DNA"
FT /country="France"
FT /isolation_source="plasma"
FT /db_xref="taxon:93678"
FT CDS 183. .494
FT /codon_start=1
FT /product="ORF2"
FT /db_xref="InterPro:IPR004118"
FT /db_xref="UniProtKB/TrEMBL:A8DMQ8"
FT /protein_id="ABU55892.1"
FT /translation="MSYKPPRYGPQGLELQFLNSIFTNHDLFCGCDDTLKHILSIFNKQ
FT NKANLSDTKIQEIKCLLTGETTETGDKGDGAAGVLDAIEDGDLDALFELSDDMDEPNG"
FT CDS 359. .2347
FT /codon_start=1
FT /product="ORF1"
FT /db_xref="InterPro:IPR004219"
FT /db_xref="UniProtKB/TrEMBL:A8DMQ9"
FT /protein_id="ABU55893.1"
FT /translation="MPAYWRNYRNWRQRRWRRRRPRRYRRWRLRRPFRAFRRYGRTQWV
FT RRKFKLSSIKLKQYQPRSIRRCVLKGMKCLFQGSAMRKSNNYWQYPHTIIPEKYPGGGG
FT WGLQVISLSSLWEDYQHLSNYFSQSNAGLPLVRFKGMKLIFYQNQNTDYVVEIENCWPM
FT VDTPLKHANSQPQRMLMSKKKIIMPSITTKRLRKGKKKIFVKPPAQMLNQWYFQKDVCN
FT TKLAIITATACSLTGYYLPYKSESNNISLNALNTNIFKNADFQQPAATTGYSPRNNYYF
FT YTTGNGTLNIPKKATELIYLGDSKNFVQGKLTEANTLKESGYPKENWGNPLWEHYITGS
FT IPLYTSSLGPTNKIWKDNAKNPTTLNTIDKYLTPLHFPPITRVRYNPDKDTGEGNIVYF
FT VDNYNRTGDNSFDPPTDVNKKIEGFPLWISLWGWADWIKKLGLLPRVDKDHILVIQSSF
FT FDVKYPYYVFLDDSFTDSLGPYNTNKTAEDEFSWHPKFWFQQKSIETICACGPGVSRAR
FT EDESLQAKMEYKVYVNWGGCPSTLEKVYDPCSQPKWPTTSDIQQTISITNPEYDPSNYF
FT YTWDTRRDFLTDTALKRLKKNQETDETISIKTGSKSSQAPISKSSKHSKKAQTKHRHRK
FT KRKRHCSSSSSDSDETTSNYSSSSSNT"
FT CDS 1992. .2561
FT /codon_start=1
FT /product="ORF3"
FT /db_xref="InterPro:IPR008474"
FT /db_xref="UniProtKB/TrEMBL:A8DMR0"
FT /protein_id="ABU55894.1"
FT /translation="MIPVHSQNGPQPVTSNKQFRSRIQNTTQATTSTLGTLEGTFLQTQ
FT LSKDLKKTKKLMRLFQLKQAQKAAKRRSPSPPNTPRKLRRSIDTGKKERDTAAQAPQTP
FT TKPPATTAAAHQIPKITIIHKPVKINLFNDPVPVKNRPFKPWEWEDEKFIASWLKRPQR
FT HYFYDKPTYPIFPITPLANFDLNFKE"
XX
SQ Sequence 2871 BP; 1107 A; 634 C; 466 G; 664 T; 0 other;
ef538881 Length: 2871 23-SEP-2007 Type: N Check: 9666 ..
1 ataaagcaaa ctgcactgac gaatggctga gtttatgccg ctagacggag
51 aacgcatcag ttactgactg cgagctgcca tcgggcgggt gctgaaggtg
101 agtgaaacca ccgaaatcaa ggggcaattc gggctatggc agtctagcgg
151 aacgggcaac taacttaaaa tattttatag gtatgtccta caaaccacct
201 cgctatggac cacaaggatt ggaattacaa tttttaaact ccatttttac
251 aaaccacgac ctgttttgtg gctgcgacga caccctaaaa catatccttt
301 caatatttaa caaacaaaac aaagcaaatc tttccgatac taaaatacaa
351 gaaataaaat gcctgcttac tggagaaact acagaaactg gcgacaaagg
401 agatggcgcc gccggcgtcc tagacgctat agaagatgga gacttagacg
451 cccttttcga gctttcagac gatatggacg aacccaatgg gtaagaagaa
501 aatttaaact gtcttctata aaactaaaac agtatcaacc tagatcaatt
551 agacgatgtg tactaaaagg aatgaaatgc ctattccaag gcagtgctat
601 gagaaaatca aacaattact ggcaatatcc tcatacaata ataccagaaa
651 aatatcctgg aggcggggga tggggactac aagtaattag cttatcatct
701 ttatgggaag actaccaaca tttatcaaac tattttagtc aaagtaatgc
751 agggctgcca cttgtaagat ttaaaggaat gaaacttatt ttttatcaaa
801 atcaaaatac agactatgta gtagaaatag aaaactgttg gcctatggta
851 gacacaccac ttaaacatgc aaactctcaa ccacaaagaa tgctaatgag
901 taagaaaaaa attattatgc ctagcataac tactaaaaga cttagaaaag
951 gtaaaaaaaa aatttttgta aaaccaccag cacaaatgtt aaaccaatgg
1001 tactttcaaa aagacgtatg taacacaaaa ctagctataa taacagccac
1051 tgcttgtagc ttaacaggct actacctacc atacaaatca gaatccaaca
1101 acatttcatt aaatgcacta aatacaaaca tatttaaaaa tgcagacttt
1151 caacaaccag cagcaacaac aggttacagc ccaagaaaca attactactt
1201 ttacaccaca ggtaatggta cactaaatat tccaaaaaaa gcaaccgaac
1251 ttatatattt aggagacagt aaaaattttg tacaaggaaa acttacagaa
1301 gcaaacacac tcaaagaaag cggataccca aaagaaaact ggggtaatcc
1351 actatgggaa cactacataa caggtagcat accattatac acatcatcac
1401 taggcccaac aaacaaaata tggaaagaca atgcaaaaaa tcccactacg
1451 ctaaacacca tagataaata tctaacacca ctccactttc cacccataac
1501 tagagtaaga tacaacccag acaaagacac aggagaagga aacatagtat
1551 actttgtaga taactataac agaacaggag acaacagctt tgatccacca
1601 acagatgtta acaaaaaaat agaaggcttt ccactatgga taagcttatg
1651 gggatgggca gactggataa aaaaactagg cctactacct agagtagaca
1701 aagatcacat tttagtaata caatcatcct tttttgatgt aaaatatcca
1751 tactatgtat tcttagatga cagttttaca gactcactag gtccatataa
1801 cacaaacaaa acagcagaag atgaatttag ctggcatcct aaattttggt
1851 ttcaacaaaa gtccattgaa accatttgtg cttgtggtcc cggtgttagc
1901 agagctagag aagatgagtc tttacaagca aaaatggaat acaaagttta
1951 tgtaaattgg ggaggctgtc catctacttt agaaaaggtt tatgatccct
2001 gttcacagcc aaaatggccc acaaccagtg acatccaaca aacaatttcg
2051 atcacgaatc cagaatacga cccaagcaac tacttctaca cttgggacac
2101 tagaagggac tttcttacag acacagctct caaaagactt aaaaaaaacc
2151 aagaaactga tgagactatt tcaattaaaa caggctcaaa aagcagccaa
2201 gcgccgatct ccaagtcctc caaacactcc aagaaagctc agacgaagca
2251 tcgacaccgg aaaaaaagaa agagacactg cagctcaagc tcctcagact
2301 ccgacgaaac caccagcaac tacagcagca gctcatcaaa tacctaaaat
2351 caccataatt cataaacctg taaaaataaa cttgtttaat gatcctgtac
2401 ctgtaaaaaa cagacctttt aaaccctggg aatgggaaga tgaaaaattt
2451 atagcatctt ggcttaaaag accacaaaga cattactttt atgacaaacc
2501 cacctaccct atatttccaa ttactcccct ggctaacttt gacttaaact
2551 ttaaagaata aaggcctaca tatttcactt agtggtgtct gtttctttaa
2601 gtttaacctt aataaacgtc caccgcctcc ctaaaatgta ggcgccaaaa
2651 ttcaaaaggg gctccgcccc ttaaacccca gggggctccg ccccctaacc
2701 ccctaggggg ctccgccccc taaaaccccc ttataaatat tcatacagga
2751 aaccacaaaa ttagaattgc cgaccacaaa cgaatatgct aattaacttc
2801 tgcaaaatgt aaccttactt ccctaaaaat taattattaa acaccgtcat
2851 aaaccatgtg actacaatac t