Sequence of DPV Potato virus Y
Potato virus Y isolate Laiwu1 polyprotein gene, partial cds.
ACC No: EF592525
Dated: 2010-12-02 | Length: 1771 | CRC: 1672889787
ID EF592525; SV 1; linear; genomic RNA; STD; VRL; 1771 BP.
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AC EF592525;
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DT 01-DEC-2010 (Rel. 107, Created)
DT 02-DEC-2010 (Rel. 107, Last updated, Version 2)
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DE Potato virus Y isolate Laiwu1 polyprotein gene, partial cds.
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KW .
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OS Potato virus Y
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
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RN [1]
RP 1-1771
RA Liu J., Yu X., Tian Y., Gao R., Zhu X., Li X.;
RT "3'- terminal genomic sequence of Potato virus Y";
RL Unpublished.
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RN [2]
RP 1-1771
RA Liu J., Yu X., Tian Y., Gao R., Zhu X., Li X.;
RT ;
RL Submitted (05-MAY-2007) to the EMBL/GenBank/DDBJ databases.
RL Department of Plant Pathology, Shandong Agricultural University, No. 61,
RL Daizong Street, Tai'an, Shandong 271018, China
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FH Key Location/Qualifiers
FH
FT source 1. .1771
FT /organism="Potato virus Y"
FT /host="potato"
FT /isolate="Laiwu1"
FT /mol_type="genomic RNA"
FT /country="China"
FT /db_xref="taxon:12216"
FT CDS <1. .1443
FT /codon_start=1
FT /product="polyprotein"
FT /protein_id="ABU95032.1"
FT /translation="GNNSGQPSTVVDNSLMVVLAMHYALIKECVEFEEIDSTCVFFVNG
FT DDLLIAVNPEKESILDRMSQHFSDLGLNYDFSSRTRRKEELWFMSHRGLLIEGMYVPKL
FT EEERIVSILQWDRADLPEHRLEAICAAMIESWGYFELTHQIRRFYSWLLQQQPFSTIAQ
FT EGKAPYIASMALKKLYMDRTVDEEELKAFTEMMVALDDEFECDTYEVYHQANDTIDAGG
FT SSKKDARPEQGSIQSNPNKGKDKDVNAGTSGTHTVPRIKAITSKMRMPKSKGATVLNLE
FT HLLEYAPQQIDISNTRATQSQFDTWYEAVRMAYDIGETEMPTVMNGLMVWCIENGTSPN
FT VNGVWVMMDGDEQVEYPLKPIVENAKPTLRQIMAHFSDVAEAYIEMRNKKEPYMPRYGL
FT IRNLRDVGLARYAFDFYEVTSRTPVRAREAHIQMKAAALKSAQPRLFGLDGGISTQEEN
FT TERHTTEDVSPSMHTLLGVKNM"
FT mat_peptide <1. .639
FT /product="polymerase; NIb"
FT mat_peptide 640. .1440
FT /product="coat protein; CP"
FT 3'UTR 1444. .1771
XX
SQ Sequence 1771 BP; 537 A; 320 C; 444 G; 470 T; 0 other;
ef592525 Length: 1771 02-DEC-2010 Type: N Check: 7884 ..
1 ggaaataata gtggtcagcc ttctaccgtt gtggataatt ctctcatggt
51 tgtccttgct atgcattacg ctctcattaa ggagtgcgtc gagtttgaag
101 aaatcgacag cacgtgtgta ttctttgtta atggtgatga cttattgatt
151 gctgtgaatc cggagaaaga gagcattctc gatagaatgt cacaacattt
201 ctcagatctt ggtttgaact atgatttttc gtcgagaaca agaaggaagg
251 aggaattgtg gttcatgtcc catagaggcc tgctaatcga gggtatgtac
301 gtgccaaagc ttgaagaaga gagaattgta tccattctgc aatgggatag
351 agctgatctg ccagagcaca gattagaagc gatctgtgca gcaatgatag
401 aatcctgggg ttattttgag ttaacgcacc aaatcaggag attctactca
451 tggttgttgc aacagcaacc tttttcaacg atagcacagg aaggaaaagc
501 tccatacata gcgagcatgg cattgaagaa gctgtacatg gataggacag
551 tagatgagga ggaactgaag gctttcactg aaatgatggt tgccttggat
601 gatgaatttg agtgcgatac ttatgaagta taccatcaag caaatgacac
651 aatcgatgca ggaggaagca gcaagaaaga tgcaagacca gagcaaggca
701 gcatccagtc aaacccgaac aaaggaaaag ataaggatgt gaatgctggt
751 acatctggga cacatactgt gccgagaatc aaggctatca cgtccaaaat
801 gagaatgccc aaaagcaagg gagcaaccgt gctaaactta gaacacttgc
851 ttgagtatgc tccacaacaa attgatattt caaatactcg ggcaactcaa
901 tcacagtttg atacgtggta tgaggcagtg cggatggcat acgacatagg
951 agaaactgag atgccaactg tgatgaatgg gcttatggtt tggtgcattg
1001 aaaatggaac ctcgccaaat gtcaacggag tctgggttat gatggatggg
1051 gatgaacaag tcgagtaccc gttgaaacca atcgttgaga atgcaaaacc
1101 aacccttagg caaatcatgg cacatttctc agatgttgca gaagcgtata
1151 tagaaatgcg caacaaaaag gaaccatata tgccacgata tggtttaatt
1201 cgaaatctgc gggatgtggg tttagcgcgt tatgcctttg acttttatga
1251 ggtcacatca cgaacaccag tgagggctag ggaagcgcac attcaaatga
1301 aggccgcagc attgaaatca gcccaacctc gacttttcgg gttggacggt
1351 ggcatcagta cacaagagga gaacacagag aggcacacca ccgaggatgt
1401 ctctccaagt atgcatactc tacttggagt caagaacatg tgatatagtg
1451 tctctccgga cgatatataa gtatttacat atgcagtaag tattttggct
1501 tttcctgtac tacttttatc ataattaata atcagtttga atattactaa
1551 tagatagagg tggcagggtg atttcgtcat tgtggtgact ctatctttta
1601 attccgcatt attaagtctt agataaaagt gccgggttgt cgttgttgtg
1651 gatgattcat cgattaggtg atgttgcgat tctgtcgtag cagtgactat
1701 gtctggatct atctgcttgg gtggtgttgt gattccgtca taacagtgac
1751 tgtaaacttc aatcaggaga c