Sequence of DPV Potato virus Y

Potato virus Y strain (N)W isolate W11 VPg mRNA, partial cds.

ACC No: EF638903

Dated: 2007-07-02 | Length: 557 | CRC: 490043403

                
ID   EF638903; SV 1; linear; mRNA; STD; VRL; 557 BP.
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AC   EF638903;
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DT   02-JUL-2007 (Rel. 92, Created)
DT   02-JUL-2007 (Rel. 92, Last updated, Version 1)
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DE   Potato virus Y strain (N)W isolate W11 VPg mRNA, partial cds.
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KW   .
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OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-557
RA   Kosakowski J., Palucha A., Doroszewska T.;
RT   "Analysis of VPg region of PVY(N)W isolates breaking resistance in virgin A
RT   mutant (VAM) tobacco";
RL   Unpublished.
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RN   [2]
RP   1-557
RA   Kosakowski J., Palucha A., Doroszewska T.;
RT   ;
RL   Submitted (30-MAY-2007) to the EMBL/GenBank/DDBJ databases.
RL   Department of Protein Biosynthesis, Institute of Biochemistry and
RL   Biophysics PAS, Pawinskiego 5a, Warsaw 02-106, Poland
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FH   Key             Location/Qualifiers
FH
FT   source          1. .557
FT                   /organism="Potato virus Y"
FT                   /specific_host="tobacco"
FT                   /strain="(N)W"
FT                   /isolate="W11"
FT                   /serotype="O"
FT                   /mol_type="mRNA"
FT                   /country="Poland"
FT                   /db_xref="taxon:12216"
FT   CDS             <1. .>557
FT                   /codon_start=1
FT                   /product="VPg"
FT                   /note="genome linked protein; structural; involved in virus
FT                   multiplication and movement"
FT                   /protein_id="ABR37290.1"
FT                   /translation="GKNKSKRIQALKFRHARDKRAGFEIDNNDDTIEEFFGSAYRKKGK
FT                   GKGTTVGMGKSSRRFINMYGFDPTEYSFIQFVDPLTGAQIEENVYADIRDIQERFSEVR
FT                   KKMVENDDIEMQALGSNTTIHAYFRKDWSDKALKIDLMPHNPLKVCDKTNGIAKFPERE
FT                   LELRQTGPAVEVDVKDIPAQEV"
XX
SQ   Sequence 557 BP; 195 A; 96 C; 140 G; 126 T; 0 other;

ef638903 Length: 557  02-JUL-2007  Type: N  Check: 1805  ..

       1  gggaaaaata aatccaaaag aattcaagcc ttgaagtttc gccatgctcg
      51  tgacaaaagg gctggctttg aaattgacaa caatgatgac acaatagagg
     101  aattctttgg atctgcatac aggaaaaagg gaaaaggtaa aggtaccaca
     151  gttggtatgg gcaagtcaag caggaggttc atcaacatgt atgggtttga
     201  tccaacagag tactcattca tccaattcgt tgatccactc actggggcgc
     251  aaatagaaga gaatgtctat gctgacatta gagatattca agagagattt
     301  agtgaagtgc gaaagaaaat ggttgagaat gatgacattg aaatgcaagc
     351  cttgggcagt aacacgacca tacatgcata cttcaggaaa gattggtctg
     401  acaaagcttt gaagattgat ttaatgccac ataatccact caaagtttgt
     451  gacaagacga atggcattgc caaatttcct gagagagagc tcgaactaag
     501  gcagactggg ccagctgtag aagtcgacgt gaaggacata ccagcacagg
     551  aggtgga