Sequence of DPV Sweet potato virus 2

Sweet potato virus Y isolate AusCan coat protein gene, partial cds.

ACC No: EF990648

Dated: 2008-05-01 | Length: 1186 | CRC: -1018453079

                
ID   EF990648; SV 1; linear; genomic RNA; STD; VRL; 1186 BP.
XX
AC   EF990648;
XX
DT   01-MAY-2008 (Rel. 95, Created)
DT   01-MAY-2008 (Rel. 95, Last updated, Version 2)
XX
DE   Sweet potato virus Y isolate AusCan coat protein gene, partial cds.
XX
KW   .
XX
OS   Sweet potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus; unclassified Potyvirus.
XX
RN   [1]
RP   1-1186
RA   Jones R.A.C., Dwyer G.I.;
RT   "Detection of Sweet potato chlorotic fleck virus and Sweet potato feathery
RT   mottle virus - strain O in Australia";
RL   Australas. Plant Pathol. 2007(36):591-594(2009).
XX
RN   [2]
RP   1-1186
RA   Dwyer G.I., Jones R.A.C.;
RT   ;
RL   Submitted (24-JUN-2007) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, Department of Agriculture and Food, Baron-Hay Court, South
RL   Perth, WA 6151, Australia
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1186
FT                   /organism="Sweet potato virus Y"
FT                   /specific_host="Ipomoea batatas"
FT                   /isolate="AusCan"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /db_xref="taxon:225962"
FT   CDS             <1. .1123
FT                   /codon_start=2
FT                   /product="coat protein"
FT                   /note="contains coat protein"
FT                   /protein_id="ABV57828.1"
FT                   /translation="LKALYTCVEPSAEDLSEYVRVLNLMYDDAVESNDCEPVYHQSGAE
FT                   ETKDAGTPTPAKSVKTRTGQTQPLKAPEGSTNPTDPPPPTVEEIIEEETPAQKALREAR
FT                   GKQPATQPSYTYGRDTGPRSPRQVTTTSRVRDRDVNAGTVGTFVVPRLKITSSKKRLPI
FT                   VDGRPVINLDHLAVYDPEQTNLANTRSTQEQFKAWYEGVKGDYGVSDAEMSILLNGLMV
FT                   WCIENGTSPNINGMWVMMDGEEQVTYPIKPLLDHAVPTFRQIMTHFSDIAEAYIEKRNR
FT                   IKAYMPRYGLQRNLTDMSLARYAFDFYELHSNTPVRAREAHMQMKAAALKNAQNRLFGL
FT                   DGNISTQEEDTERHTTTDVTRNIHNLLGMRGVQ"
XX
SQ   Sequence 1186 BP; 412 A; 231 C; 271 G; 272 T; 0 other;

ef990648 Length: 1186  01-MAY-2008  Type: N  Check: 5883  ..

       1  actgaaagct ctgtacacat gtgttgaacc atcagctgaa gatttgtccg
      51  agtatgttcg tgttttgaac ttgatgtatg atgatgctgt tgaatcgaat
     101  gattgcgagc cagtctatca tcaatcaggc gctgaagaaa caaaagacgc
     151  tggaacccca acaccagcaa aatcagttaa gacaagaaca gggcaaactc
     201  aaccgcttaa agcaccagaa gggagtacga atccaacaga tccaccacct
     251  ccaacagttg aagagataat tgaagaagaa acaccagcac aaaaagcatt
     301  gagggaagcc cgtggcaagc aaccagcaac acaaccctca tacacttatg
     351  ggcgagacac aggaccgcgt agcccaaggc aagttacaac aacaagcaga
     401  gttagggata gagatgttaa tgctggaaca gtagggacgt ttgtagttcc
     451  aagacttaaa attacatcaa gcaagaagag attgccaata gttgacggac
     501  gtccagtaat caacctggat cacttggcag tttacgatcc agagcaaaca
     551  aatcttgcaa ataccagatc aacacaagaa caatttaagg catggtatga
     601  aggtgtgaag ggtgattatg gggtatctga tgctgaaatg agcatactcc
     651  ttaatggcct catggtttgg tgtattgaga atggtacatc accgaatatt
     701  aatggaatgt gggtgatgat ggacggagaa gaacaagtaa cttatccaat
     751  aaaacctcta ttggatcatg ctgtccccac atttagacag ataatgacac
     801  acttcagcga catagctgaa gcgtacattg aaaagagaaa caggataaag
     851  gcttatatgc caaggtatgg cctacagagg aatttgactg atatgagtct
     901  tgcgcggtat gcattcgatt tctatgaact ccactcaaac acaccagtaa
     951  gagcaaggga ggcacatatg caaatgaaag cagcagcttt aaagaatgca
    1001  cagaatcgcc tgtttggttt ggatggaaac atctccacgc aagaagaaga
    1051  cacggagagg catacaacga ctgatgttac aagaaatata cataacctgt
    1101  taggaatgag aggtgtgcag taaacaatat attgctcgta cttttaattt
    1151  cagttggtct ttaatttaaa ttcgtgtctt tcagtc