Sequence of DPV Grapevine fanleaf virus

Grapevine fanleaf virus isolate RS coat protein gene, partial cds.

ACC No: EU038294

Dated: 2007-08-06 | Length: 1515 | CRC: -556026780

                
ID   EU038294; SV 1; linear; genomic RNA; STD; VRL; 1515 BP.
XX
AC   EU038294;
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DT   06-AUG-2007 (Rel. 92, Created)
DT   06-AUG-2007 (Rel. 92, Last updated, Version 1)
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DE   Grapevine fanleaf virus isolate RS coat protein gene, partial cds.
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KW   .
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OS   Grapevine fanleaf virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Comoviridae;
OC   Nepovirus; Subgroup A.
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RN   [1]
RP   1-1515
RA   Fajardo T.V.M., Kuhn G.B., Eiras M., Nickel O.;
RT   "Partial characterization of an isolate of Grapevine fanleaf virus";
RL   Fitopatol. Bras. 25:505-511(2000).
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RN   [2]
RP   1-1515
RA   Radaelli P., Fajardo T.V.M., Eiras M., Kuhn G.B., Pio Ribeiro G.,
RA   Nickel O.;
RT   ;
RL   Submitted (17-JUL-2007) to the EMBL/GenBank/DDBJ databases.
RL   Laboratorio de Virologia, Embrapa Uva e Vinho, Rua Livramento, 515, Bento
RL   Goncalves, RS 95700-000, Brasil
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1515
FT                   /organism="Grapevine fanleaf virus"
FT                   /specific_host="grape cv. Prosecco Tondo"
FT                   /lab_host="Chenopodium amaranticolor"
FT                   /isolate="RS"
FT                   /mol_type="genomic RNA"
FT                   /country="Brazil"
FT                   /db_xref="taxon:12274"
FT   CDS             <1. .1515
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="ABS76285.1"
FT                   /translation="GLAGRGVVYIPKDCQANRYLGTLNIRDMISDFKGVQYEKWITAGL
FT                   VMPIFKIVVRLPANALTGLTWVMSFDAYNRITGRITASADPAYTLSVPHWLIHHKLGTF
FT                   SCEIDYGELCGHAMWFKSTTFESPRLHFTCLTGNNKELAADWQAVVELYAELEEATTFL
FT                   GKPTLVFDPGVFNGKFQFLTCPPIFFDLTAVTALKSVGLTLGQVPMVGTTKVYNLNSTL
FT                   VSCVLGMGGTIRGRVHICAPIFYSIVLWVVSEWNGTTMDWNELFKYPGVYVEEDGSFEV
FT                   KIRSPYHRTPARLLAGQTQRDMSSLNFYAIAGLIAPSGETARLPIVVQIDEIMRPDFSL
FT                   PSFEDDYFVWVDFSEFTLDKEEIEIGSRFFDFTSNTCRVSMGENPFAAMIACHGLHSGI
FT                   LDLKLQWSLNTEFGKSSGSVTITKLVGDKTLGLDGPSQVFAMQKLEGTTELLIGNFAGA
FT                   NPNTHFSLYSRWMAIKLDQAKSIKVLRVLCKPRPGFSFYGRTSFPV"
XX
SQ   Sequence 1515 BP; 393 A; 299 C; 374 G; 449 T; 0 other;

eu038294 Length: 1515  06-AUG-2007  Type: N  Check: 2496  ..

       1  ggattagctg gtagaggagt ggtctacatc cccaaggatt gccaggcaaa
      51  taggtacttg ggcaccctga acatacgtga catgatttca gattttaagg
     101  gtgttcagta cgaaaagtgg ataactgcag gattagtcat gcctattttt
     151  aaaatagttg ttaggctacc tgcaaatgcc cttactggac taacgtgggt
     201  gatgagcttc gatgcttata accggataac tggcagaatt actgccagtg
     251  cagatcctgc atacacctta tcagtcccac attggcttat ccatcataag
     301  ttgggcacgt tttcatgtga gattgattac ggagagttgt gtggccacgc
     351  catgtggttt aaatccacga cttttgaatc tccaaggcta catttcacgt
     401  gtttaacggg caacaacaaa gagctagcgg cagactggca agctgtcgta
     451  gaactgtatg ccgaattgga agaggccact acttttcttg ggaaaccaac
     501  tttggttttc gacccaggag tctttaatgg caaattccag tttttgactt
     551  gccctcccat attttttgat ttaacggccg tcactgccct caagagtgtt
     601  gggctgacat tgggacaagt cccaatggtt ggtactacta aggtttataa
     651  cctaaatagc actcttgtaa gctgtgtttt aggtatggga ggtactatta
     701  gaggaagggt acacatctgt gcaccaatct tttatagtat tgttttatgg
     751  gtcgttagtg agtggaacgg gaccactatg gattggaatg aacttttcaa
     801  atatcccggg gtgtatgtgg aagaggatgg aagctttgaa gtcaaaatac
     851  gctctccata tcaccgaacg cctgctagat tgcttgctgg tcaaacacag
     901  agggacatga gctctctgaa cttctatgca atagcgggcc ttattgctcc
     951  gtccggtgag actgcgcgac ttcccattgt tgtgcagatt gacgaaatca
    1001  tgcgcccaga tttctctcta ccaagttttg aagatgatta cttcgtgtgg
    1051  gtggactttt ctgagtttac tcttgataaa gaagaaattg agattggatc
    1101  tcgtttcttt gattttactt cgaatacttg tagggtttct atgggagaaa
    1151  acccgttcgc tgcaatgatt gcctgtcatg gactgcatag tggtatatta
    1201  gacctaaaac ttcagtggag tctaaatact gaatttggca agagcagcgg
    1251  gagtgttact attacgaagc tggtgggtga taaaaccctg ggcttggatg
    1301  ggccgtctca ggtttttgcc atgcaaaaac tggaaggaac tacagaattg
    1351  ttgattggga attttgcagg agctaaccca aacactcatt tctcccttta
    1401  cagtcgatgg atggcaatta agctggatca agcaaagagt attaaagtgc
    1451  tccgtgtttt gtgcaagcct cgcccaggtt tcagttttta cggaaggacc
    1501  agctttccag tctag