Sequence of DPV Tuberose mild mottle virus
Tuberose mild mottle virus polyprotein gene, partial cds.
ACC No: EU042759
Dated: 2007-08-20 | Length: 1553 | CRC: 384403290
ID EU042759; SV 1; linear; genomic RNA; STD; VRL; 1553 BP.
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AC EU042759;
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DT 20-AUG-2007 (Rel. 92, Created)
DT 20-AUG-2007 (Rel. 92, Last updated, Version 1)
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DE Tuberose mild mottle virus polyprotein gene, partial cds.
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KW .
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OS Tuberose mild mottle virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus; unclassified Potyvirus.
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RN [1]
RP 1-1553
RA Pham K.T.K., van Kampen D., Marsman J., Derks A.F.L.M.;
RT "Molecular identification of potyviruses in Tuberose";
RL Unpublished.
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RN [2]
RP 1-1553
RA Pham K.T.K., van Kampen D., Marsman J., Derks A.F.L.M.;
RT ;
RL Submitted (18-JUL-2007) to the EMBL/GenBank/DDBJ databases.
RL Applied Plant Research; section Flower bulbs and Nursery stocks, Wageningen
RL UR, Postbus 85, 2160 AB, Lisse, The Netherlands
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FH Key Location/Qualifiers
FH
FT source 1. .1553
FT /organism="Tuberose mild mottle virus"
FT /specific_host="tuberose"
FT /mol_type="genomic RNA"
FT /country="Netherlands"
FT /isolation_source="diseased leaves"
FT /db_xref="taxon:244050"
FT CDS <1. .1385
FT /codon_start=3
FT /product="polyprotein"
FT /protein_id="ABU41879.1"
FT /translation="AWVAPQKVKGCASVFCSTKRDLIFALRPDMSHVLDSFQQSFSELG
FT LNYTFESGTFDQSEVWFMSHQGINKDGIYFPKLEMERVVSILEWDRSSEPEHRLEAICA
FT AMIEAWGYEQLLYQIRLFYAWVLEMEPYKSLATIGKAPYISEIALRKLYLDVKHSETEL
FT EVYLQYMLEQYNLSQDTQIDLDVHHQSGNPSPTDPQQEPNPENLDAGKDNKGKNSQTSN
FT RGKDRDVNAGTVGSKRVPRITKMMSTMQIPNVDGIATLDPEHLLSYLPKQVNLHNTRAT
FT AQQYKTWYESVKSDYGVSDEEMRIIMNGFTVWCIENGTSPNINGVWTMMDGDEQVTFQL
FT KPMVEHAKPTLRQIMAHHSDVAEAYIVMRNTIEPYMPRYGLQRNITDRGLAQYAFDFYE
FT VTSRTPVRAREAHFQMKAAALRGKQSKLFGLDGNVGGTDENTERHTTDDVNRDMHTXVG
FT SA"
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SQ Sequence 1553 BP; 479 A; 332 C; 369 G; 372 T; 1 other;
eu042759 Length: 1553 20-AUG-2007 Type: N Check: 5569 ..
1 aggcctgggt tgccccccaa aaggtaaaag gatgtgcttc ggttttttgt
51 tcaacgaaga gagatttgat ttttgccctt cgcccagata tgtcacacgt
101 ccttgacagt ttccaacaat catttagtga actgggtctt aattatactt
151 ttgaatcagg gacctttgac cagagcgagg tgtggttcat gtcgcaccaa
201 gggatcaata aagacggaat ttactttccg aagctggaaa tggagagagt
251 ggtctccata ctcgaatggg atcggagtag tgagccagaa cacagactgg
301 aagctatctg cgctgcgatg atcgaagcat ggggctatga gcaactgttg
351 taccaaatcc gattgttcta tgcatgggtg cttgagatgg agccatataa
401 atcactagct acaattggca aagctccgta catatctgag atcgcgctcc
451 gaaagctgta tctggacgtc aaacattctg agactgaact cgaagtttac
501 ttgcaataca tgttagaaca atacaacttg tcgcaagaca cacagatcga
551 cctggacgtc catcatcaaa gtgggaatcc gtcaccaacc gatccgcaac
601 aagaaccaaa tccagaaaat cttgacgctg gtaaagacaa taaaggtaaa
651 aactcccaaa ccagtaacag aggcaaagac agggatgtga atgctggtac
701 tgtgggaagc aaaagagtgc ctcgaattac gaagatgatg tcaacaatgc
751 aaatcccaaa tgttgacggg atagctacac ttgatcccga acacttgcta
801 tcctatctac ctaaacaggt caacctccat aacacacgcg cgacagcgca
851 gcaatacaaa acatggtacg agagtgttaa aagcgattat ggagtatctg
901 atgaggagat gaggataatc atgaacggct tcacagtgtg gtgcattgaa
951 aacggcacat caccaaacat aaacggtgtt tggacaatga tggatggtga
1001 tgaacaagtc accttccagt taaaaccgat ggttgaacat gcaaagccaa
1051 cattgcgcca aataatggca catcacagtg acgttgctga agcgtacatt
1101 gtgatgagaa ataccatcga accgtacatg cctaggtacg gattgcagcg
1151 aaacatcacc gacaggggcc tggcacaata cgcgtttgac ttttatgaag
1201 tcacatcacg cacaccagtg cgcgcgcgag aggcccattt ccaaatgaaa
1251 gcagctgctt tgcgtggcaa acaaagtaag ctatttggac tggatggcaa
1301 tgtgggtggt actgacgaga acacggagcg tcatacaact gacgatgtta
1351 atagagacat gcacactttn gttgggagtg cgtaacctgt agggtcctat
1401 tattaactag tgttccctcg cggacacatt tatgcattta tgttatgttg
1451 tttcatattt gtatcttatg tgcctcaaac tttcatgttt agtctcagta
1501 gcgaggtttt acctccaaga gcctttgcat gggagggcga aacaaaaaaa
1551 aaa