Sequence of DPV Potato virus Y

Potato virus Y isolate Irbid coat protein gene, partial cds.

ACC No: EU073856

Dated: 2008-07-15 | Length: 805 | CRC: 1876386726

                
ID   EU073856; SV 1; linear; genomic RNA; STD; VRL; 805 BP.
XX
AC   EU073856;
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DT   15-JUL-2008 (Rel. 96, Created)
DT   15-JUL-2008 (Rel. 96, Last updated, Version 1)
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DE   Potato virus Y isolate Irbid coat protein gene, partial cds.
XX
KW   .
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OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-805
RA   Odeh W.H., Anfoka G.H.;
RT   "Characterization of plant viruses affecting potato crop in Jordan";
RL   Unpublished.
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RN   [2]
RP   1-805
RA   Odeh W.H., Anfoka G.H.;
RT   ;
RL   Submitted (30-JUL-2007) to the EMBL/GenBank/DDBJ databases.
RL   Department of Biotechnology, Al-Balq` Applied University, Salt 19117,
RL   Jordan
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FH   Key             Location/Qualifiers
FH
FT   source          1. .805
FT                   /organism="Potato virus Y"
FT                   /specific_host="Solanum tuberosum"
FT                   /isolate="Irbid"
FT                   /mol_type="genomic RNA"
FT                   /country="Jordan"
FT                   /PCR_primers="fwd_name: PVYCPcEcoRI, fwd_seq:
FT                   agagagaattcatcacatgttcttgactcc, rev_name: PVYCPvBamHI,
FT                   rev_seq: tcaaggatccgcaaatgacacaattgatgca"
FT                   /db_xref="taxon:12216"
FT   CDS             <1. .804
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /protein_id="ACF33051.1"
FT                   /translation="ANDTIDAGGSTKKDAKQEQGSIQPNLNKEKEKDVNVGTSGTHTVP
FT                   RIKAITSKMRMPKSKGATVLNLEHLLEYAPQQIDISNTRATQSQFDTWYEAVQLAYDIG
FT                   ETEMPTVMNGLMVWCIENGTSPNINGVWVMMDGDEQVEYPLRPIVENAKPTLRQIMAHF
FT                   SDVAEAYIEMRNKKEPYMPRYGLVRNLRDGSLARYAFDFYEVTSRTPVRAREAHIQMKA
FT                   AALKSAQSRLFGLDGGISTLEENTERHTTRDVSPSMHTLLGVKNM"
XX
SQ   Sequence 805 BP; 275 A; 164 C; 189 G; 177 T; 0 other;

eu073856 Length: 805  15-JUL-2008  Type: N  Check: 4718  ..

       1  gcaaatgaca ccattgatgc aggaggaagc actaagaagg atgcaaaaca
      51  agagcaaggt agcattcaac caaatctcaa caaggaaaag gaaaaggacg
     101  tgaatgttgg aacatctgga actcatactg tgccacgaat taaagctatc
     151  acgtccaaaa tgagaatgcc caagagtaaa ggtgcaactg tactaaattt
     201  ggaacactta ctcgagtatg ctccacagca aattgacatc tcaaatactc
     251  gagcaactca atcacagttt gatacgtggt atgaagcggt acaacttgca
     301  tacgacatag gagaaactga aatgccaact gtgatgaatg ggcttatggt
     351  ttggtgcatt gaaaatggaa cctcgccaaa catcaacgga gtttgggtta
     401  tgatggatgg agatgaacaa gtcgaatacc cactgagacc aatcgttgag
     451  aatgcaaaac caacacttag gcaaatcatg gcacatttct cagatgttgc
     501  agaagcgtat atagaaatgc gcaacaaaaa ggaaccatat atgccacgat
     551  atggtttagt tcgtaatctg cgcgatggaa gtttggctcg ctatgctttt
     601  gacttttatg aggtcacatc acgaacacca gtgagggcta gggaagcgca
     651  cattcaaatg aaggccgcag cattgaaatc agcccaatct cgacttttcg
     701  ggttggacgg tggcatcagt acactagagg agaacacaga gaggcacacc
     751  acccgagatg tctctccaag tatgcatact ctacttggag tcaagaacat
     801  gtgat