Sequence of DPV Banana streak MY virus
Banana streak Mys virus isolate TRY, complete genome.
ACC No: EU140339
Dated: 2008-10-16 | Length: 7650 | CRC: -667204930
ID EU140339; SV 1; circular; genomic DNA; STD; VRL; 7650 BP.
XX
AC EU140339;
XX
DT 16-OCT-2008 (Rel. 97, Created)
DT 16-OCT-2008 (Rel. 97, Last updated, Version 1)
XX
DE Banana streak Mys virus isolate TRY, complete genome.
XX
KW .
XX
OS Banana streak Mys virus
OC Viruses; Retro-transcribing viruses; Caulimoviridae; Badnavirus.
XX
RN [1]
RP 1-7650
RA Selvarajan R., Balasubramanian V., Mustaffa M.;
RT "Characterization of banana streak mysore virus and evidence that its DNA
RT is integrated in the b genome of cultivated musa";
RL Unpublished.
XX
RN [2]
RP 1-7650
RA Selvarajan R., Balasubramanian V., Mustaffa M.;
RT ;
RL Submitted (01-SEP-2007) to the EMBL/GenBank/DDBJ databases.
RL Molecular Virology Lab, National Research Centre for Banana, Thogamalai
RL Road, Thayanur Post, Tiruchirapalli, Tamil Nadu 620102, India
XX
FH Key Location/Qualifiers
FH
FT source 1. .7650
FT /organism="Banana streak Mys virus"
FT /specific_host="Musa sp. cv. Poovan (Mysore,AAB)"
FT /isolate="TRY"
FT /mol_type="genomic DNA"
FT /country="India"
FT /db_xref="taxon:328672"
FT 5'UTR 1. .563
FT CDS 564. .1490
FT /codon_start=1
FT /product="unknown"
FT /note="ORF I"
FT /protein_id="ACA34589.1"
FT /translation="MDTYWDKIFENYKNSHTKSIADLEYLNLAGIEKVSNKDLAHNLHV
FT NTYRSDLGFKVVIASLTKERKLNLQNKEELEKLHKKLELFGDLDKIVRSQRTELKKANQ
FT SLEDLNRELQALRSDYLSRRPLSKKDVEELVLRISEQPKLVEQQTEALTRELSEKVDKV
FT EAHIHSSGESYYWMSLANTKASPLYKEAISATSNGWEEQGVGFTERGTASLAILTRQLN
FT TLIYSVVKIKDDIEGLKEEVTQIHQRVKSIEKKSGQSSEGAPDYKADLDEITKRLSSLT
FT IQGDKIREVGGNLKVFKNPYEILRSLQ"
FT CDS 1092. .1490
FT /codon_start=1
FT /product="virion associated protein"
FT /note="ORF II"
FT /protein_id="ACA34590.1"
FT /translation="MSLANTKASPLYKEAISATSNGWEEQGVGFTERGTASLAILTRQL
FT NTLIYSVVKIKDDIEGLKEEVTQIHQRVKSIEKKSGQSSEGAPDYKADLDEITKRLSSL
FT TIQGDKIREVGGNLKVFKNPYEILRSLQ"
FT misc_feature 1487. .7099
FT /note="nonfunctional polyprotein due to mutation; encodes
FT movement protein, coat protein, aspartic protease, reverse
FT transcriptase and RNase H; ORF III"
FT 3'UTR 7100. .7650
XX
SQ Sequence 7650 BP; 2623 A; 1534 C; 1730 G; 1763 T; 0 other;
eu140339 Length: 7650 16-OCT-2008 Type: N Check: 1861 ..
1 tggtatcaga gcagggttca ctgtaagtaa atttatggct ttcatggggt
51 aattccctag gataggagcc taagggctct ttttatgcat atttctgaat
101 ttctgttaag actatgcttt atatactctg aagcgaattt ctggcaagta
151 agttttaaga agtagatggt aataccttat gaggagtaat actacatatc
201 tagactaagg aatgtcttag gaaagaggcg atgagaagat aaggtgacta
251 ctgggaatag acgtaagccc attgtaagtc ccgaggaagg gcagcttgtg
301 gcaaaaaggt gactcagtat aacctgaaga tatcgcgtct ctgtctaatt
351 taatatcctg agactcctaa aatccggata tgatagtaaa actctgataa
401 agcaaaagcc tgaagctcga aatactgcta gccagagata aactaaggaa
451 atataaagtc gtgctcttaa ctttaattta caagaaaaat gcataaataa
501 cccgaaggtt ctttatctgc ttcaaagcat ttagtttact taaaccttga
551 accaaagcta attctggata cttactggga taaaatcttt gaaaattaca
601 agaactctca tactaagtca attgcagatc ttgaatattt gaacttagca
651 ggaattgaaa aggtctcaaa taaagaccta gcacataact tgcacgttaa
701 tacttataga agtgatcttg gatttaaagt tgttattgca tcacttacta
751 aggaaagaaa gttaaatttg caaaataaag aagagcttga aaaacttcac
801 aagaagcttg aactgtttgg agatctagac aagattgtca gatcccaaag
851 aactgaactc aaaaaggcta atcaaagcct tgaggactta aacagggaac
901 tgcaagccct gcgttctgac tatctctcca ggcgccctct atcaaagaag
951 gacgtagaag aacttgttct acgtatcagt gagcagccaa agctcgttga
1001 acaacaaaca gaggccttga caagagagct ctctgaaaag gttgacaagg
1051 tggaggccca tatccactcg tctggagaaa gttattattg gatgagtcta
1101 gccaacacca aggctagccc gctttacaag gaagccatat ctgctacatc
1151 caacggctgg gaagaacaag gcgtaggatt tactgaaagg ggaactgcat
1201 cccttgctat tctgacgcgc caactcaaca ccctcattta ctcggtggtc
1251 aaaatcaaag acgacatcga aggactaaaa gaagaagtta cccaaatcca
1301 ccaaagggta aaatcaattg agaagaaatc agggcaatca tcagaaggag
1351 cccctgatta caaggcggac ttggacgaaa tcaccaaaag actaagttct
1401 ctcactattc agggagacaa gatccgagaa gtaggaggca atctcaaagt
1451 tttcaaaaat ccctacgaaa ttctaagatc cctacaatga caacccgaag
1501 gtccagtcta cccacggtga ccgaaacaat gggtcccagt acatctggaa
1551 gagatgggac cccacttatt gaagaccaaa ttagagatta ccgggcatcc
1601 gcaaggagac ggtatgaagc acaacgggtt gccagaaaca tcggcaacgt
1651 cggaaggaga ctcatcggga ggcaaacccg agaggatacc ctggccctac
1701 tcatggaccc ggaagtagag ttacaaagat ctatgcggga acgagcaaga
1751 acagtccccg ccgaagtatt atacatgtca agacgagatg acgttcacca
1801 tcgcgtctac cacttcagat ctgaggagcg aatgatggtc agtgacgctg
1851 accaacaaga tcggacattt atttctgaag aatcttttga aagactacaa
1901 caagctggac tcacgtatat acatcttgga gtcctgcaag tccggttcca
1951 gatccttcat aggacctttg ctggaactat ggcactccct ggtgattccg
2001 agacaccaga tggacggctg atgatcggtc tatcatatca gccatggaag
2051 tggacctagc tgaaggcaat cagctaatct atgtcatccc caacataatg
2101 atgactattg gagacttcta ccgacatatt catatctcca tacgcacaag
2151 gggatatggt tcttgggaag gaggcgaggc gaacctcctt atcacccgaa
2201 gcgtaacagc taggctttcc aacacatcca atgttggatt cgcctaccgt
2251 attgatcgag tagctgaata cctcaggacg aagggggtaa gggctatcga
2301 cgccacaaag catgatgcga gaagattcca acacggggaa tggaatttaa
2351 gaccatctac ggctgtagta cccgtacaac ccacaagcat cacatctgct
2401 gttaattatg accgcagtat atctctacga tttggggact accaagcggc
2451 atcctcatcc agaccaccag tctacaacaa gaatgatgac gaggtagact
2501 ctgatgaaga aacttttcaa attaatatgg ttttactcgg agatgatatg
2551 gactacccca tgttccgaga gcttgagaag ttatatataa cttctgaaag
2601 catggtgggg gaggatgatg aggaagaaaa atcagaaaat cttgatgatg
2651 aggaagctca tgctgatttc caaaaattcc tcaattattc tgatgaagta
2701 aatacaattc aagatttcct caatcaatat gacgcagaca tctctgaaga
2751 tgaagcaaat tatgatgtag gagttctgga agaatatcca gaattactga
2801 aattggaaaa taacctggca gaaatcccca tactcagcga ggtcacatcc
2851 cagtacagac ctgcagacat tgacatggcc ggcccaactg gatatgcccc
2901 ggctacgtct cagcaaggac tattaggctc aacagcacct gatcgtttgg
2951 gcaaaggctc ttttaaatgg aaaagcccaa ctgagtactt taacttaccc
3001 tcagcccaac aacaagctgg agcgatgttc gtaatgccag caaatttcga
3051 ccccaaagta tttgaaagat gggagtcgat cacgctaaac cacatgacgg
3101 ataggtcttc tccactgctg aagacaaact catatacttg gaaatctact
3151 tggagaagca gagaagatca tgttccaaag ttggcgaatg acctatgcaa
3201 acgaatacga agagatgaag ggttcaagcc ctagctaaca acggtacgca
3251 aaatttactc tctcaaatcc ggtagaatct tttatctgga agatcccaaa
3301 actggaacta cggtatctca agatgcggct tacaaggcaa tcaagagcct
3351 agtatgccat gaaatgacgg gaactgccat taaaagatat atggcggatt
3401 actggactct ggcggctaag acaggaagga tatggcaagg accagagcta
3451 tccgacgaat tcttcaccaa actaccaagc gggcttggtg acagagtggc
3501 aaaggctttc aaagaaaaat actcttggaa atacggtcgg agtacctgcc
3551 aggattactt tcacacaact atacctagag gagctttgca gagaagctgc
3601 ataccagaga tccctaaaga atttggactt ctgcagagaa ttccctattc
3651 ccggctacta caagaaacct ggaagaaagt ttggagtaag aaagtccaca
3701 tcatacaagg gaaaaccgca taagacccat atcaagatag acaaaagaaa
3751 atatctgcgg aacaagaagt gcaaatgtta tgcctgcgga gaagaaggtc
3801 attatgcaag tgaatgccga aacccaagaa aattaatgga gagggtttca
3851 gtactgcaag atttagaact tgggaaggat atggaaatag tctctgtaga
3901 ggaaaatgag actgaattat ctgacattta ttctatttct gaaggagagg
3951 aatctggacc acccaagtct gaaataatga gtctggaact attcatgctc
4001 cacgaaattg aagatgaacc tgaagcatgt cttatcggag caacggacac
4051 ctggaggaat caaatgaaag tttccagaaa ggaatactac tgtcaacatg
4101 agtgggacca caccactaaa gttgtcgaaa gatgtagagc atgcacctac
4151 tatatcacca gccagccgag gataaagtgc acaaagtgta agatccctat
4201 ctgcaacctt tgcacaaatt actgctatgg gattaaaatg gctgatgaaa
4251 aagaaaaaga aaaggagaaa gaaaaagaat ctgacttact tggactagta
4301 aataattgcc gagaaattat ggccaagtac agaacagaaa aggaggtact
4351 cttagaggag cccaacaatg cattaaaaca agctaaagag tacaaggaga
4401 aatttgagca tctggaaggc atctgtgagg agcaagaagc agaaaataaa
4451 gccttagctc aggaaaatca agatttgaag gaaaaggtgg aagaattaaa
4501 ggaagaaaat gaaatcctga aagatcagaa tactaccatg ggacaagaaa
4551 tggtaaagat tcaggaaaaa caacaggaag ctgaaaaatt ccttagaaga
4601 gaaatcaaaa ggagagagca agcaaacaca gaaaaattag ctcttatgat
4651 gaatgaggtt tgcacagaaa gagagtatga atatcagatc aacgcaacca
4701 cggttcaaaa caacctctat aacatcaaaa tcggcctgga agttgatgga
4751 gaaaagaaat ttctgaatgc catactggac actggggcag caacatgcgt
4801 agtatcacaa gctaaagtgt cagaaagatt cctggagcca tcagctatga
4851 aggtagaact aagaggagta aacggtacct ccaaagtcaa taaagtcctc
4901 aaagaaggta aaatttggat tggtaatcag tattttcggt tacctaggac
4951 ttatgcactg gaaatagaat tatctggagg tatagacatg ataatcggta
5001 cgaatttctt aagggctatg tctggtggag ttcgtataga aggagaaaca
5051 gttactttct ataagatagt gaccacgaca gatgcaccaa aggtccctca
5101 ccagataaat ttaattgagg agctggaaat gagcgaagag gaatttattg
5151 aggtccaaat atcaacaagt actgaaggat atatcaacaa ggagataatg
5201 gactcaaaac tgtttaagga attaaaggat caggggtata tcggggaaga
5251 gcctctgaag cactggcaga aaaacatggt taagtgcaaa ctcgagctga
5301 aaaacccaga tatcactatt caagacaaac cccttaagca tgtgacagca
5351 aaaatgaggg aaaccatgag ggctcatatt gataagctgc tgcaattgaa
5401 agtgatcaga ccctcatcca gtcgacacag gaccactgcc atgattgttg
5451 aaagcggaac agaagtggat ccaaagacag gacaagaaaa gagaggaaaa
5501 gagagattgg tcttcaactt caagagactg aatgacaata ctgagaaaga
5551 ccaatactcc ctcccaggaa taaacacgat tatcagtcga attggaaatg
5601 ccaaagttta ttcaaaattc gacttaaaaa gtggtttcca tcaagtagcc
5651 atggatcctg aatccatccc atggacggct ttcctggcta acaatgagct
5701 ctatgagtgg cttgtcatgc ccttcggtct gaagaatgct ccagcaatat
5751 tccaacgaaa gatggacacc tgttttaaag gtactgaagc cttcattgct
5801 gtttatatag atgatatttt agtattttct gagaccgaac aattgcatag
5851 agaccactta agaaaattcc tggaaatcag taaggccgat gggctcatat
5901 taagcccaac caagatgaaa ataggggtca aaactattga cttcctagga
5951 gcctctatag gaaactccaa gatcaagctt cagcctcata ttatcaagaa
6001 aatagctgac ttcgacgatc ataggctgaa agaaacaaaa ggtttgaggg
6051 catggcttgg gatattaaac tatgcaagaa actacatccc aaacttagga
6101 aaaactctag gccctcttta ctctaagata tcaccaaatg gggagaaaag
6151 aatgaacgct caggattggg cactagtcac tcaggttaaa agacaagtcc
6201 agaacctacc agagctggaa ttacccccag aaaaatgtaa aatggtgata
6251 gaaacggacg gctgcatgga aggttggggc ggcgtctgta agtggactac
6301 tgtcggcaag gcacaagaaa aagtatgcgc ctatgccagt ggaaagttta
6351 cccccatcaa aagcactatt gatgcggagg tacaggctgt aattaacagc
6401 cttgataagt tcaaaatata ctatttggac aagaaggagt tattgatcag
6451 aacagactgt gaagctatag tcaggttcta taaaagcaca gctcagaaca
6501 aaccctcccg ggttagatgg ctcatgctga ccgacttcat ctcgggtacg
6551 ggtctagaaa taaaatttga gcatattaat ggctgcgaga atatattggc
6601 agactccctc tctagactag tccaaacact gttacaagga tggcagcatc
6651 aacacataaa tgaaatcata ctggctctag aagaattgta tcaaaagccc
6701 aacccagaag tcgcgaagaa aatcgggcag atcattatga aagttctgga
6751 gaagccagct ggaatacaga tgaatatgat cactgaagga cctaaacttc
6801 ggtgcgcatg tggaaaagat gctgagatag ctgtctccca cacttcgaga
6851 aatcctgacc gaccctttta caaatgccaa agaaatctgt gccacatttg
6901 gatatggaaa gacttagtgg atgactactt tcaaaactta acggcgtgga
6951 acagaatctc tgaagaacac agaagggaaa tggctcgtga agaaggtcag
7001 aatctggaag aagaagacta ctgggagaat gtattcaatg aggttttcga
7051 ccacgaagaa atcacggagt tctaccctga cggaggagat cccggttaga
7101 aacaaggaag cgtgaagagg acccattaca gctgtgatcg cacccacaag
7151 ctgtgtcaga aagaaaggta tggtgcaggg cggctagcgc tcaattatct
7201 tgcttttcag ttttcaattc tgtaaatggc agacagagtg aggtgtcaaa
7251 ggacgatggg gcccaatgag tacccgcttt ggctacttta caatctgaaa
7301 gctatgcttt tattttgtta agctgatcct gagcctcggg gagccggatc
7351 tagcatagta aaaccagagg cgcccctggt attggcgctg cggttttaag
7401 cccacggttt tcggactcca tgagttttga aatccgacgg ctttagtctg
7451 agaaggctca gcctttctct atataagggt ttgtaacccc tcgttgcaag
7501 catagtcgga aataccagac tgcttacttc gagttttgaa atcccaataa
7551 gaatcctcag ttttcttcat ccttctttcg gttcacttcc tgaaattggg
7601 caagccccat agtaaggaaa gatccatttg gtgtaattcc gcttcactcc