Sequence of DPV Opium poppy mosaic virus
Opium poppy mosaic virus hypothetical protein gene, partial cds; RNA-dependent RNA polymerase-like gene, complete sequence; and putative phloem RNA movement protein and putative cell-to-cell movement protein genes, partial cds.
ACC No: EU151723
Dated: 2011-07-07 | Length: 3270 | CRC: 1084265449
ID EU151723; SV 2; linear; genomic RNA; STD; VRL; 3270 BP. XX AC EU151723; XX DT 02-OCT-2007 (Rel. 93, Created) DT 07-JUL-2011 (Rel. 109, Last updated, Version 2) XX DE Opium poppy mosaic virus hypothetical protein gene, partial cds; DE RNA-dependent RNA polymerase-like gene, complete sequence; and putative DE phloem RNA movement protein and putative cell-to-cell movement protein DE genes, partial cds. XX KW . XX OS Opium poppy mosaic virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Umbravirus; OC unclassified Umbravirus. XX RN [1] RP 1-3270 RA Tang J., Wei T., Ochoa-Corona F., Clover G.; RT "Identification and characterization of Opium poppies mosaic virus: a novel RT member of Umbravirus"; RL Unpublished. XX RN [2] RP 1-3270 RA Tang J., Wei T., Ochoa-Corona F., Clover G.; RT ; RL Submitted (12-SEP-2007) to the INSDC. RL Investigation and Diagnostic Centres, Biosecurity, Ministry of Agriculture RL and Forestry, 231 Morrin Road, St Johns, PO box 2095, Auckland 1140, New RL Zealand XX CC On Jul 6, 2011 this sequence version replaced gi:157696066. XX FH Key Location/Qualifiers FH FT source 1. .3270 FT /organism="Opium poppy mosaic virus" FT /host="Papaver somniferum (opium poppy)" FT /mol_type="genomic RNA" FT /country="New Zealand" FT /note="PCR_primers=fwd_name: OPMVf1, rev_name: OPMVr1; FT PCR_primers=fwd_name: OPMVf2, rev_name: OPMVr2" FT /db_xref="taxon:473784" FT CDS <1. .903 FT /codon_start=1 FT /product="hypothetical protein" FT /note="ORF1" FT /db_xref="GOA:A8HB26" FT /db_xref="InterPro:IPR002166" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:A8HB26" FT /protein_id="ABV66257.2" FT /translation="NYKDNRNIKSRNECNVAFDEDWGTLITQKRMQLEAERQYRDWYNA FT ASPTTCVMPPLPDAELMEEARVSKVKAALEQPKQKSTEAAEPVPNSVLDAIEEEKALLE FT LRALPSVAENRRFEALKPQAVKLDAVPQCTDVGRERWAIIPYTGGPRVLQEDEVLPRAP FT AVICLSDAPVPTSKILPRFNACFDTIQRVTKWRKVARDDFLEEAARVDPQYNNVQVPGE FT VMRSMNAQSVAMELRARYGMQPCTAANLQLGNRVAREILDRQCQATREQVYYYGHLATT FT MWFQPTLVDLALRAGAKDF" FT misc_feature 810. .2555 FT /note="similar to RNA-dependent RNA polymerase; ORF2" FT CDS 2724. .>3270 FT /codon_start=1 FT /product="putative phloem RNA movement protein" FT /note="ORF3" FT /protein_id="AEJ80234.1" FT /translation="MADGYSMATTPNVNSCGKSRFQGRIVERVVRRGDSKGTRRDKPRN FT PHPPQSREEGGRNPSLAPQDPGKNRRCSKKTAHHPPHRRATIHRKDSSGVHPPRTRRRR FT RGGANLGPRQHVTPSKQRWGTCELPAERRAEIDGLLSPILNTANMQGWGYPEVLLYSIR FT VLRGELRFWSKPVQPAHNV" FT CDS 2731. .>3270 FT /codon_start=1 FT /product="putative cell-to-cell movement protein" FT /note="ORF4" FT /protein_id="AEJ80235.1" FT /translation="MGIAWRLHQMSTAVAKADSKEELLNALYGEVTVKELEETNLGILT FT PHRAERKVVATPLLPPKTQGRIAGVLRKLRTTRHTGGLLFIEKIVVVFTPHVPDDVVGE FT VQIWVHDNMLPHLNSVGERVSFPLSGGPRLMAYYPPYSIPLTCRVGDTPRCFYIVSEYS FT GVNFASGASPFSLHIMW" XX SQ Sequence 3270 BP; 889 A; 817 C; 890 G; 674 T; 0 other; eu151723 Length: 3270 07-JUL-2011 Type: N Check: 7308 .. 1 aattacaaag acaaccgcaa catcaaaagc agaaatgagt gcaatgtagc 51 tttcgacgag gactggggaa ctctaataac ccagaaacgc atgcaactgg 101 aggccgagcg tcagtaccgt gactggtaca acgctgcgag tcccaccact 151 tgcgttatgc caccactccc ggatgcagag cttatggaag aggcccgggt 201 tagcaaggtg aaggccgccc tggaacagcc caaacaaaaa tccacagagg 251 cggcagagcc agtaccaaac tctgtactgg atgccataga ggaggagaaa 301 gccctcctgg agttgcgtgc gctaccctcc gtagctgaaa acaggaggtt 351 tgaggcgctg aaaccccaag cagtcaagct tgatgccgtt ccacaatgca 401 ccgatgtggg acgagagagg tgggccataa ttccctacac gggtgggcca 451 cgggtgttac aggaggatga ggttctcccc cgtgcaccag ccgtcatttg 501 cctcagtgac gcacccgtcc ccacgtctaa aattcttcca aggttcaatg 551 cctgctttga cacgattcag cgtgtaacaa agtggaggaa ggtcgcaagg 601 gacgacttcc tcgaagaggc ggcgcgggtt gacccccagt ataacaatgt 651 gcaggttcct ggggaggtca tgaggagcat gaatgctcaa agtgtggcga 701 tggagctacg tgcccgctac ggcatgcaac catgcacagc tgccaacttg 751 cagctcggga atcgggtggc tcgtgaaata ctggacagac aatgccaggc 801 cacccgtgaa caggtgtatt actatggaca cctggccaca accatgtggt 851 tccaacccac cttagtggac ctagccctca gggctggggc caaggatttt 901 tagttgggga tgtgtacgct cgtgcggggt ttgagactaa ggtcgaaaca 951 tcattacacc ccgcaatacg agtgatacga gcggcgcgtc cccgtgccgt 1001 agaaagagtg tcgtaccaga tagacgtagt acgaccctgc gctgatttcg 1051 gtgtccacaa caactccctt aacaatctca ttaggggagt caatgagagg 1101 gtgttcttca cagaccacaa aaggtcatca cccaccaagc cactaccagg 1151 cgcgtttgac gagatatgtg tatcagactt gaagtcattc aaggtcacgc 1201 cctggaccat ggagcaggta gtagattcat acgcgggttc acagaagaca 1251 cgctaccaaa atgctcttga gagtttgaat acccaaccgc ttacccgatc 1301 ggacgcaaga gttaagacgt tcgtcaaggc cgagaagatc aatttcaccg 1351 cgaaaccaga tcctgcaccg agagtgatac aacctaggga tcctaggttc 1401 aacctctgct tcgccaagta cacgaagcca ctcgagccaa tgttgtataa 1451 gcaactgggt aagttgtata ggtacccctg catcgcaaag gggttcaacg 1501 cagtagaaac cggagagata atagcaaaga aatgggcaat gttcaaaaat 1551 ccggtttgtg tggggttaga cgccagcaga tttgaccagc atgtgtcagt 1601 tgaagcactg cggttcaccc acaaggttta caagagattc gtcaaagggc 1651 atgaggtcaa taagcttcta tcgtggatgt acacgaacca tgctctaggg 1701 tccgcaaagg atggatttgt caagtacgag gtcaccggct gtcgaatgag 1751 tggtgatatg gacacagccc tcggaaactg cacccttatg gtgttgatga 1801 caagacatct atgcaagtct cttggtattg agcacgagat tatgaacaac 1851 ggtgacgatt gtatcataat catggataag tcgaagctca ccttactgca 1901 agaaaacgta gtaccatact acgaaaggtt gggattcaag atgaaggtgg 1951 aggctccagt ctaccacctc gaacgagttg atttttgcca gacccgcccg 2001 gtgtacgatg ggcgtaagtg gagaatggtc aggcatatat ccagcatagc 2051 caaagattgc tgcacagtga tcaactggga gcagctcgcg ccctggtggt 2101 gcgctattgg tacttgcgga ttagctgtcg ccggtggaat gcccatccac 2151 aactcgttct taaagtggct gaagcgctcc ggaggtgaag aaggtggtgt 2201 aagatcccac gccctctgga agaatgaagg attaagctgg tatcgtatgg 2251 gtttagacct gtcgcacgag gacacggtca ctgatgaagc gagacttagc 2301 ttccagactg cctttggtat atcaccagag atgcaagtag ccctggagca 2351 aatttatgat aatttgcccg ccccaacagt tgacggacgt gattaccgca 2401 cgaggggaat acgaatgtgt aacattgtga gtgagcttcc atcacgtcat 2451 ttcaaccatt attttgagga cgtgcccact tacaccagca tggaatcctc 2501 cgctacccct gggaacctca actttgaacc agggttgttg tggaacttca 2551 catagtgaag cgctcctgaa tgccgacagg agatgaacgt actaggcaag 2601 tgggaatgct agccgggtta gtgttgcaat cgccggagca taagtcacta 2651 cagaggggga agtcccgaca acgccattga atcagctacc ttgtgtgccc 2701 acccagacgg ccagccgcgg acaatggccg atgggtatag catggcgact 2751 acaccaaatg tcaacagctg tggcaaaagc agattccaag gaagaattgt 2801 tgaacgcgtt gtacggagag gtgacagtaa aggaactaga agagacaaac 2851 ctaggaatcc tcacccccca cagagcagag aggaaggtgg tcgcaacccc 2901 tctcttgccc cccaagaccc agggaagaat cgcaggtgtt ctaagaaaac 2951 tgcgcaccac ccgccacaca ggagggctac tattcatcga aaagatagta 3001 gtggtgttca ccccccacgt accagacgac gtcgtagggg aggtgcaaat 3051 ttgggtccac gacaacatgt taccccatct aaacagcgtt ggggaacgtg 3101 tgagcttccc gctgagcgga gggccgagat tgatggccta ctatccccca 3151 tactcaatac cgctaacatg cagggttggg gataccccga ggtgcttcta 3201 tatagtatca gagtactcag gggtgaactt cgcttctgga gcaagcccgt 3251 tcagcctgca cataatgtgg