Sequence of DPV Opium poppy mosaic virus
Opium poppy mosaic virus hypothetical protein gene, partial cds; RNA-dependent RNA polymerase-like gene, complete sequence; and putative phloem RNA movement protein and putative cell-to-cell movement protein genes, partial cds.
ACC No: EU151723
Dated: 2011-07-07 | Length: 3270 | CRC: 1084265449
ID EU151723; SV 2; linear; genomic RNA; STD; VRL; 3270 BP.
XX
AC EU151723;
XX
DT 02-OCT-2007 (Rel. 93, Created)
DT 07-JUL-2011 (Rel. 109, Last updated, Version 2)
XX
DE Opium poppy mosaic virus hypothetical protein gene, partial cds;
DE RNA-dependent RNA polymerase-like gene, complete sequence; and putative
DE phloem RNA movement protein and putative cell-to-cell movement protein
DE genes, partial cds.
XX
KW .
XX
OS Opium poppy mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Umbravirus;
OC unclassified Umbravirus.
XX
RN [1]
RP 1-3270
RA Tang J., Wei T., Ochoa-Corona F., Clover G.;
RT "Identification and characterization of Opium poppies mosaic virus: a novel
RT member of Umbravirus";
RL Unpublished.
XX
RN [2]
RP 1-3270
RA Tang J., Wei T., Ochoa-Corona F., Clover G.;
RT ;
RL Submitted (12-SEP-2007) to the INSDC.
RL Investigation and Diagnostic Centres, Biosecurity, Ministry of Agriculture
RL and Forestry, 231 Morrin Road, St Johns, PO box 2095, Auckland 1140, New
RL Zealand
XX
CC On Jul 6, 2011 this sequence version replaced gi:157696066.
XX
FH Key Location/Qualifiers
FH
FT source 1. .3270
FT /organism="Opium poppy mosaic virus"
FT /host="Papaver somniferum (opium poppy)"
FT /mol_type="genomic RNA"
FT /country="New Zealand"
FT /note="PCR_primers=fwd_name: OPMVf1, rev_name: OPMVr1;
FT PCR_primers=fwd_name: OPMVf2, rev_name: OPMVr2"
FT /db_xref="taxon:473784"
FT CDS <1. .903
FT /codon_start=1
FT /product="hypothetical protein"
FT /note="ORF1"
FT /db_xref="GOA:A8HB26"
FT /db_xref="InterPro:IPR002166"
FT /db_xref="InterPro:IPR007094"
FT /db_xref="UniProtKB/TrEMBL:A8HB26"
FT /protein_id="ABV66257.2"
FT /translation="NYKDNRNIKSRNECNVAFDEDWGTLITQKRMQLEAERQYRDWYNA
FT ASPTTCVMPPLPDAELMEEARVSKVKAALEQPKQKSTEAAEPVPNSVLDAIEEEKALLE
FT LRALPSVAENRRFEALKPQAVKLDAVPQCTDVGRERWAIIPYTGGPRVLQEDEVLPRAP
FT AVICLSDAPVPTSKILPRFNACFDTIQRVTKWRKVARDDFLEEAARVDPQYNNVQVPGE
FT VMRSMNAQSVAMELRARYGMQPCTAANLQLGNRVAREILDRQCQATREQVYYYGHLATT
FT MWFQPTLVDLALRAGAKDF"
FT misc_feature 810. .2555
FT /note="similar to RNA-dependent RNA polymerase; ORF2"
FT CDS 2724. .>3270
FT /codon_start=1
FT /product="putative phloem RNA movement protein"
FT /note="ORF3"
FT /protein_id="AEJ80234.1"
FT /translation="MADGYSMATTPNVNSCGKSRFQGRIVERVVRRGDSKGTRRDKPRN
FT PHPPQSREEGGRNPSLAPQDPGKNRRCSKKTAHHPPHRRATIHRKDSSGVHPPRTRRRR
FT RGGANLGPRQHVTPSKQRWGTCELPAERRAEIDGLLSPILNTANMQGWGYPEVLLYSIR
FT VLRGELRFWSKPVQPAHNV"
FT CDS 2731. .>3270
FT /codon_start=1
FT /product="putative cell-to-cell movement protein"
FT /note="ORF4"
FT /protein_id="AEJ80235.1"
FT /translation="MGIAWRLHQMSTAVAKADSKEELLNALYGEVTVKELEETNLGILT
FT PHRAERKVVATPLLPPKTQGRIAGVLRKLRTTRHTGGLLFIEKIVVVFTPHVPDDVVGE
FT VQIWVHDNMLPHLNSVGERVSFPLSGGPRLMAYYPPYSIPLTCRVGDTPRCFYIVSEYS
FT GVNFASGASPFSLHIMW"
XX
SQ Sequence 3270 BP; 889 A; 817 C; 890 G; 674 T; 0 other;
eu151723 Length: 3270 07-JUL-2011 Type: N Check: 7308 ..
1 aattacaaag acaaccgcaa catcaaaagc agaaatgagt gcaatgtagc
51 tttcgacgag gactggggaa ctctaataac ccagaaacgc atgcaactgg
101 aggccgagcg tcagtaccgt gactggtaca acgctgcgag tcccaccact
151 tgcgttatgc caccactccc ggatgcagag cttatggaag aggcccgggt
201 tagcaaggtg aaggccgccc tggaacagcc caaacaaaaa tccacagagg
251 cggcagagcc agtaccaaac tctgtactgg atgccataga ggaggagaaa
301 gccctcctgg agttgcgtgc gctaccctcc gtagctgaaa acaggaggtt
351 tgaggcgctg aaaccccaag cagtcaagct tgatgccgtt ccacaatgca
401 ccgatgtggg acgagagagg tgggccataa ttccctacac gggtgggcca
451 cgggtgttac aggaggatga ggttctcccc cgtgcaccag ccgtcatttg
501 cctcagtgac gcacccgtcc ccacgtctaa aattcttcca aggttcaatg
551 cctgctttga cacgattcag cgtgtaacaa agtggaggaa ggtcgcaagg
601 gacgacttcc tcgaagaggc ggcgcgggtt gacccccagt ataacaatgt
651 gcaggttcct ggggaggtca tgaggagcat gaatgctcaa agtgtggcga
701 tggagctacg tgcccgctac ggcatgcaac catgcacagc tgccaacttg
751 cagctcggga atcgggtggc tcgtgaaata ctggacagac aatgccaggc
801 cacccgtgaa caggtgtatt actatggaca cctggccaca accatgtggt
851 tccaacccac cttagtggac ctagccctca gggctggggc caaggatttt
901 tagttgggga tgtgtacgct cgtgcggggt ttgagactaa ggtcgaaaca
951 tcattacacc ccgcaatacg agtgatacga gcggcgcgtc cccgtgccgt
1001 agaaagagtg tcgtaccaga tagacgtagt acgaccctgc gctgatttcg
1051 gtgtccacaa caactccctt aacaatctca ttaggggagt caatgagagg
1101 gtgttcttca cagaccacaa aaggtcatca cccaccaagc cactaccagg
1151 cgcgtttgac gagatatgtg tatcagactt gaagtcattc aaggtcacgc
1201 cctggaccat ggagcaggta gtagattcat acgcgggttc acagaagaca
1251 cgctaccaaa atgctcttga gagtttgaat acccaaccgc ttacccgatc
1301 ggacgcaaga gttaagacgt tcgtcaaggc cgagaagatc aatttcaccg
1351 cgaaaccaga tcctgcaccg agagtgatac aacctaggga tcctaggttc
1401 aacctctgct tcgccaagta cacgaagcca ctcgagccaa tgttgtataa
1451 gcaactgggt aagttgtata ggtacccctg catcgcaaag gggttcaacg
1501 cagtagaaac cggagagata atagcaaaga aatgggcaat gttcaaaaat
1551 ccggtttgtg tggggttaga cgccagcaga tttgaccagc atgtgtcagt
1601 tgaagcactg cggttcaccc acaaggttta caagagattc gtcaaagggc
1651 atgaggtcaa taagcttcta tcgtggatgt acacgaacca tgctctaggg
1701 tccgcaaagg atggatttgt caagtacgag gtcaccggct gtcgaatgag
1751 tggtgatatg gacacagccc tcggaaactg cacccttatg gtgttgatga
1801 caagacatct atgcaagtct cttggtattg agcacgagat tatgaacaac
1851 ggtgacgatt gtatcataat catggataag tcgaagctca ccttactgca
1901 agaaaacgta gtaccatact acgaaaggtt gggattcaag atgaaggtgg
1951 aggctccagt ctaccacctc gaacgagttg atttttgcca gacccgcccg
2001 gtgtacgatg ggcgtaagtg gagaatggtc aggcatatat ccagcatagc
2051 caaagattgc tgcacagtga tcaactggga gcagctcgcg ccctggtggt
2101 gcgctattgg tacttgcgga ttagctgtcg ccggtggaat gcccatccac
2151 aactcgttct taaagtggct gaagcgctcc ggaggtgaag aaggtggtgt
2201 aagatcccac gccctctgga agaatgaagg attaagctgg tatcgtatgg
2251 gtttagacct gtcgcacgag gacacggtca ctgatgaagc gagacttagc
2301 ttccagactg cctttggtat atcaccagag atgcaagtag ccctggagca
2351 aatttatgat aatttgcccg ccccaacagt tgacggacgt gattaccgca
2401 cgaggggaat acgaatgtgt aacattgtga gtgagcttcc atcacgtcat
2451 ttcaaccatt attttgagga cgtgcccact tacaccagca tggaatcctc
2501 cgctacccct gggaacctca actttgaacc agggttgttg tggaacttca
2551 catagtgaag cgctcctgaa tgccgacagg agatgaacgt actaggcaag
2601 tgggaatgct agccgggtta gtgttgcaat cgccggagca taagtcacta
2651 cagaggggga agtcccgaca acgccattga atcagctacc ttgtgtgccc
2701 acccagacgg ccagccgcgg acaatggccg atgggtatag catggcgact
2751 acaccaaatg tcaacagctg tggcaaaagc agattccaag gaagaattgt
2801 tgaacgcgtt gtacggagag gtgacagtaa aggaactaga agagacaaac
2851 ctaggaatcc tcacccccca cagagcagag aggaaggtgg tcgcaacccc
2901 tctcttgccc cccaagaccc agggaagaat cgcaggtgtt ctaagaaaac
2951 tgcgcaccac ccgccacaca ggagggctac tattcatcga aaagatagta
3001 gtggtgttca ccccccacgt accagacgac gtcgtagggg aggtgcaaat
3051 ttgggtccac gacaacatgt taccccatct aaacagcgtt ggggaacgtg
3101 tgagcttccc gctgagcgga gggccgagat tgatggccta ctatccccca
3151 tactcaatac cgctaacatg cagggttggg gataccccga ggtgcttcta
3201 tatagtatca gagtactcag gggtgaactt cgcttctgga gcaagcccgt
3251 tcagcctgca cataatgtgg