Sequence of DPV Potato yellow dwarf virus
Potato yellow dwarf virus nucleocapsid protein (N) mRNA, complete cds.
ACC No: EU183122
Dated: 2007-11-01 | Length: 1520 | CRC: -987014545
ID EU183122; SV 1; linear; mRNA; STD; VRL; 1520 BP.
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AC EU183122;
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DT 01-NOV-2007 (Rel. 93, Created)
DT 01-NOV-2007 (Rel. 93, Last updated, Version 1)
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DE Potato yellow dwarf virus nucleocapsid protein (N) mRNA, complete cds.
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KW .
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OS Potato yellow dwarf virus
OC Viruses; ssRNA negative-strand viruses; Mononegavirales; Rhabdoviridae;
OC Nucleorhabdovirus.
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RN [1]
RP 1-1520
RA Ghosh D., Brooks R.E., Lesnaw J.A., Goodin M.M.;
RT "Cloning and subcelluar localization of the phosphoprotein and nucleocapsid
RT proteins of Potato yellow dwarf virus, type species of the genus
RT Nucleorhabdovirus";
RL Unpublished.
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RN [2]
RP 1-1520
RA Ghosh D., Brooks R.E., Lesnaw J.A., Goodin M.M.;
RT ;
RL Submitted (28-SEP-2007) to the EMBL/GenBank/DDBJ databases.
RL Plant Pathology, University of Kentucky, 1405 Veterans Drive, Lexington, KY
RL 40546, USA
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FH Key Location/Qualifiers
FH
FT source 1. .1520
FT /organism="Potato yellow dwarf virus"
FT /strain="sanguinolenta"
FT /mol_type="mRNA"
FT /country="USA"
FT /db_xref="taxon:195060"
FT gene 1. .1520
FT /gene="N"
FT CDS 13. .1431
FT /codon_start=1
FT /gene="N"
FT /product="nucleocapsid protein"
FT /protein_id="ABW35154.1"
FT /translation="MNNANTAQFVQLLKGGKEYEDWNSRDDIPAADGKLVQIEYSDADF
FT WSKLTTIYSLDDLGPSDLVAAWTRIRESIDNSTISESIIGEIFRVAAHIKKVEDKTSRI
FT IGSFAPPTARGVVTKTGLDTAPIVFGQSVTVGADITVQNTAPTVRTTDAGDAVVSAPYL
FT CMALLRLMTKPVESFNRSLTTIRTSYGRFYGMQSAEVTNFSAPLNSLQQLSTGLDTYPT
FT CNSTMAWMMGFAEGSILRNNKNHGFMRFLIFQHAEMRGMQIYKMILTALAGLPAITPAQ
FT FLRAIEIPDAVKAIKTVMKIATTLDKPGRQDPTYWWKYGKYIEPSYFVDLSVGRNTKFA
FT YLMACILNEMSLINGPEYANPKNIKALESIKNNIELTNYYEGLSRNFSILYRSLETESG
FT IGIGIAMQMGGAPAPKARAQKRANEEAPPAAQKRATPAAQQDQQAAGTSGTASATPVDA
FT MNAALQSGVLDQLP"
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SQ Sequence 1520 BP; 454 A; 345 C; 365 G; 356 T; 0 other;
eu183122 Length: 1520 01-NOV-2007 Type: N Check: 9683 ..
1 aaacacacaa tcatgaataa cgctaacacc gctcagttcg tgcagttgtt
51 gaaggggggg aaagagtatg aggattggaa ttcgcgtgat gatatacccg
101 cagcagatgg aaagttagtt cagatagagt attctgatgc ggatttttgg
151 agtaagttga ccacgatata cagtctcgat gatcttggac cgagtgattt
201 ggttgcagcg tggactagaa tcagagaaag tatcgataat agtactatct
251 ctgaatctat aatcggagag attttccgtg tggcagcaca cattaaaaag
301 gtagaggata agaccagcag aattatcggt agctttgctc ctcccacagc
351 gcgaggcgtc gtcaccaaga ccggactaga caccgctccc atcgtattcg
401 gacagtcggt tacagtaggt gcagatatta ctgttcagaa caccgctccc
451 accgtccgca caacagacgc aggagacgct gtggtatctg caccttacct
501 gtgcatggcc ttgctacgcc tgatgactaa accggtggaa tcctttaacc
551 ggtctttaac taccattaga acaagttacg ggagattcta cgggatgcag
601 tcagcggaag tcaccaattt ttcggcaccg cttaactcac ttcaacagtt
651 atccaccggg ctagacacat atccgacatg caattcgaca atggcatgga
701 tgatggggtt tgctgaaggg agtatcctca gaaacaacaa aaatcatggt
751 ttcatgaggt ttctgatctt tcagcatgct gagatgagag gtatgcagat
801 ctataaaatg atcctgacag ctctagctgg actgccagcc attacccctg
851 ctcaatttct gagagctatt gaaatacctg atgctgtaaa ggcaatcaag
901 acagtgatga agattgccac caccctggat aaaccgggga gacaagaccc
951 cacctactgg tggaaatatg ggaagtacat agaaccatcc tactttgtag
1001 atctaagtgt gggtaggaat acaaagtttg cctatctaat ggcatgcatc
1051 ctcaatgaga tgagcttaat caatggtcct gaatatgcca accccaaaaa
1101 cataaaggct cttgagtcca ttaaaaacaa catagagctc acaaactact
1151 acgaaggact ttcaaggaac ttctctatcc tctacaggtc cttggagaca
1201 gagagtggca ttggaatagg tatagcaatg cagatgggag gagcccccgc
1251 tcccaaggca agagcacaga aacgtgccaa tgaagaagca ccaccagcag
1301 cacagaagag agccacacca gcagcccagc aggaccagca agcagcgggg
1351 acatccggaa cagcatcagc cactccggtg gatgcaatga atgctgctct
1401 acaatccgga gtgctggacc agctgcccta gtcgagctag atggtaattg
1451 tcctttgttt tatgttgttc cgtttaaata tctattgtgt aatagtatgt
1501 gtgtgtgcct taacaaaaaa