Sequence of DPV Kupe virus
Kupe virus isolate K611 segment M, complete sequence.
ACC No: EU257627
Dated: 2009-02-03 | Length: 4818 | CRC: -2012168601
ID EU257627; SV 1; linear; viral cRNA; STD; VRL; 4818 BP.
XX
AC EU257627;
XX
DT 01-JAN-2009 (Rel. 98, Created)
DT 03-FEB-2009 (Rel. 99, Last updated, Version 3)
XX
DE Kupe virus isolate K611 segment M, complete sequence.
XX
KW .
XX
OS Kupe virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Nairovirus.
XX
RN [1]
RP 1-4818
RA Crabtree M.B., Sang R., Miller B.R.;
RT "Kupe Virus, a New Virus in the Family Bunyaviridae, Genus Nairovirus,
RT Kenya";
RL Emerg. Infect. Dis. 15(2):147-154(2009).
XX
RN [2]
RP 1-4818
RA Crabtree M.B., Sang R., Miller B.R.;
RT ;
RL Submitted (31-OCT-2007) to the EMBL/GenBank/DDBJ databases.
RL DVBID, CDC, 3150 Rampart Rd., Fort Collins, CO 80521, USA
XX
FH Key Location/Qualifiers
FH
FT source 1. .4818
FT /organism="Kupe virus"
FT /segment="M"
FT /host="Amblyomma gemma (tick)"
FT /isolate="K611"
FT /mol_type="viral cRNA"
FT /country="Kenya"
FT /collection_date="1999"
FT /db_xref="taxon:498356"
FT CDS 48. .4697
FT /codon_start=1
FT /product="glycoprotein"
FT /protein_id="ABY82501.1"
FT /translation="MRVILLLCMLSVAFANSTASSSSTAVSTYSTITTDTSTTDASTAE
FT SPTTPHTSPSTNTEGTTSTEPHTTKQLSTRTSTRSTSTSQRVWKEVAMHGEILSRNVRS
FT SSYKDALNARILSLMDVGLGDPDKHLDNICSNRKVNCSVEALRSRLAEFFSDTHANACY
FT NEVLERHLCDVNPQVSQRPSKVLGIDDTVLLRELDRRILRFFSDTARMTCLSASLLKPD
FT SFVDWHEPRVIPINGPKQLPVHNVHCLNIELESQNDGNLIIVHVSLSSVDVVLKDCKAT
FT INLRQCLYMHTGTGKIRVPKFIKQDRETSGKSNKLGIGVYTITLDLLDTANLNCRLTTQ
FT CIVKGKELKKGQSEMKGYTTELVFPRASPLKRRILAVNEPSANCNSGTHLSDSKSIEVH
FT GDHNGGPGQKITFCNGSLVLDVQLGSREGCYTVNKVTTKRVCKPRTSVAACKIEKELKN
FT CDSGKCLQISQEGLGKIKVARGSTIVITDCRKQCLIPIPADTGDILVDCSGGKQHFLES
FT NIVDVHCPKARYFNGIMLYFCRMSHRPIVAVTFGLWLGCGYVVTCIASFILYYLIFFLA
FT NAVKKCRQRREKPGALCLKCEQKTLNIYDQELHDLNCSFNLCPYCCNRMSDEGIVRHVG
FT KCPKREERLFEIETYMNYIRVPVFFRCLLSISIGVGTFLKRATWLAILIILFCITIAPV
FT QGQQLNEMANIGGQDYSICFFLFGCLVASAALLKLRRVNSGSVIEVIDCFGRCSFCGEF
FT TDCLFEEIVHDTLCNLCVCPYCEGQSLDITTLRIHVGDCYKTNTRKQIYKILGRKFTQS
FT LVAREGLFTTKLQIIFNKTNTILFIFAICFLILFTAHPVHGFDSGNLPKGVWEDSEDLI
FT AFCTQTCFIEEDECICPEINPNARRLLFFNGLQNAIRRSTESKKLMTSLSIDTPWGAIN
FT VESTYKPTLATSNIGMSWSSADIRGDKVILSGKSSSIIKLNAKTGIMWELGSELASEKK
FT NLLISIMDYTQSYNAAFEYITGDRTLSEWPKAVCTGDCPHKCGCTTTTCMFKEWPHTRN
FT WRCNPTWCWGIGTGCTCCGMDVEKPFNRFFAVKWSLEYIKTEALMCIEVTNEERHCEIV
FT EAGTRFTIGPVTATISDTQNIVNKLPTEIMTIQKLDDSRFVDIMHVSNVISAENSCKLQ
FT SCTHGSAGDIQIYHTDNLIKNDHSSGINLAAIDPLVNTSWLSWEGCDMDYFCNVGDWPT
FT CTYTGVVTQNTESFENLLNIEKDYTKRFFFHTKRIMANSGTLQMDLKARPNEGGGEVTV
FT LVEVENMELHSKTIKLAGIKISNLKCSGCYSCTSGILCSLVARIDNPDEFIIHLRSKDP
FT DVVVADTGIVARKGISNSAGKIRVFSVAEKKKLCFEVVEGSYCKDCSRDQLNVCTDVNL
FT EPPKDILLEHRGTIVQHKNDTCSSGIDCWSKSISSFASGVGIFFTRYFGSVVLGLLGTL
FT LPFILVIIFFIWGDKLLKPCSIFFRCCRQRHHQHKYSSLSEEEELRDIVRKFNKSGELL
FT EKGENDKRTIARLFMADVKGKGKKLKELA"
XX
SQ Sequence 4818 BP; 1505 A; 944 C; 1071 G; 1298 T; 0 other;
eu257627 Length: 4818 03-FEB-2009 Type: N Check: 7859 ..
1 tctcaaagac agacctgcgg cacatgcaag tgttaaagga agtcagaatg
51 agagtaatct tgctactctg catgctgagt gtggcatttg ccaacagtac
101 agcaagcagt agtagcactg ccgtctcgac atacagtacc atcaccacag
151 atacaagtac aactgatgca tctacagccg agagtccaac cacaccacac
201 acaagcccca gcacgaacac cgaaggcaca accagcaccg agcctcacac
251 caccaaacaa cttagcacca gaacaagcac cagaagcaca tcaacatcac
301 agagagtgtg gaaagaggtt gcaatgcatg gtgagattct cagtagaaat
351 gtgaggtcaa gttcttataa ggatgcacta aatgctagaa tcttaagcct
401 gatggatgtt ggattaggtg atccagacaa acatcttgat aacatctgca
451 gtaacaggaa agttaattgt tcagtggaag ctctgagatc aaggttggct
501 gaatttttct ctgacactca tgcgaatgcc tgctacaatg aggttctcga
551 aaggcatttg tgtgatgtta atccacaggt cagtcagaga ccctcaaagg
601 tcctgggtat tgatgacact gtcctactaa gagagctaga caggaggata
651 cttaggttct tttctgacac tgccagaatg acttgtttat cagcctccct
701 tttaaaacct gactcttttg tggattggca tgaaccaaga gttattccta
751 ttaatggacc aaaacaatta ccagttcaca atgttcactg tctgaatatt
801 gaacttgagt cacagaatga tggaaatctg ataattgtgc atgtgtcact
851 cagtagtgtt gatgtggtac tcaaggactg caaagcaaca ataaacctga
901 ggcagtgttt atatatgcac acgggtacag gaaaaataag ggttcccaaa
951 ttcatcaagc aagacagaga aacttctgga aaatccaaca aacttgggat
1001 aggtgtttac acaatcactc ttgacctctt ggacactgcc aacctgaact
1051 gtaggttaac aacacagtgc atagtaaaag gtaaggagct taagaagggc
1101 caaagtgaga tgaaaggtta tacaacagaa ctagtgttcc caagagcatc
1151 tcctttaaaa agaaggatac ttgcagtcaa tgaaccatca gcaaactgca
1201 actctggaac gcatctgtct gattcaaagt ctattgaggt gcatggtgac
1251 cacaatggag gtccaggaca gaagataaca ttctgtaatg gctccttagt
1301 gttggatgta cagcttggct ctagagaggg ttgctatact gtaaataaag
1351 tcacaactaa aagggtgtgt aagcccagaa catcagttgc agcctgtaaa
1401 attgaaaagg agctaaagaa ctgtgattca ggaaagtgtc tacaaatatc
1451 tcaagaaggg ctagggaaaa tcaaagttgc tcgaggttca actatagtta
1501 ttacggactg tcgaaagcag tgtttgattc caattccggc ggatacaggt
1551 gatattttag ttgactgttc aggagggaaa cagcacttcc tagaaagcaa
1601 tattgttgat gttcactgcc caaaggccag atactttaat ggaattatgc
1651 tgtatttttg ccgtatgtct cacagaccta ttgtggctgt aacctttggc
1701 ttatggcttg gatgtggtta cgtcgtaact tgcattgctt cctttatctt
1751 atactaccta atcttttttt tggctaatgc agtaaaaaaa tgtcgacaaa
1801 ggagagagaa accaggagcg ctgtgtttga aatgtgagca aaaaacactc
1851 aatatctacg accaggagct tcacgaccta aattgctctt ttaatctgtg
1901 tccttactgt tgcaatagga tgtcagatga gggtatagtg agacatgttg
1951 gcaagtgtcc taaaagagaa gagaggctgt ttgaaattga aacttacatg
2001 aattacatta gggtgccagt tttttttaga tgtcttctct ccatatctat
2051 tggtgttggc acttttctta aaagagcaac ttggttagca atccttataa
2101 ttcttttttg tatcacaatt gcacctgtcc agggccagca gctcaatgaa
2151 atggcgaaca ttggaggtca ggattacagt atttgcttct tcctgtttgg
2201 ctgtttggta gcatcagctg ccctgctgaa gctcagaaga gtgaacagtg
2251 gatcggttat tgaagtcatc gattgttttg gaaggtgtag cttttgtggt
2301 gaatttacag attgtttgtt tgaggaaatt gtccatgaca ctctatgcaa
2351 tctctgcgtg tgcccttact gcgaaggtca atcccttgac atcaccaccc
2401 tccggataca tgtaggagac tgctacaaga caaatacaag aaagcagatc
2451 tacaagatac ttggaagaaa gttcactcag tctctagtag ctagggaagg
2501 gctcttcaca acaaagcttc agatcatttt caacaagaca aatactatct
2551 tgttcatctt tgcaatctgc ttcttaattc ttttcacagc tcaccctgtg
2601 catggatttg attccgggaa cttgcccaaa ggagtatggg aggactccga
2651 agatttaatt gcattctgca ctcaaacctg cttcatagag gaagatgaat
2701 gcatctgccc tgagatcaac cccaatgcaa gaaggcttct tttttttaat
2751 ggtttacaga atgccataag aaggtcaaca gaatccaaga agttgatgac
2801 cagcctctca attgacacac catggggtgc aattaatgtg gagtcgactt
2851 acaagccaac cctagcaact tcaaatatcg ggatgagctg gagctcagct
2901 gacataagag gcgataaagt cattctgtca ggaaagagtt catcgatcat
2951 aaagttaaat gcaaaaacag gcattatgtg ggaattaggc tctgaattgg
3001 cttcggaaaa gaagaacctc cttatttcta taatggatta cacacagtct
3051 tacaatgcag cttttgagta catcacaggt gacagaacac taagtgaatg
3101 gcccaaagca gtgtgtactg gcgattgtcc tcacaagtgc ggctgcacaa
3151 ccacaacatg tatgtttaaa gagtggcctc acacacgcaa ctggaggtgc
3201 aacccaactt ggtgttgggg tattggaaca ggttgcacct gttgcggtat
3251 ggacgttgaa aagccattta acaggttctt tgcagtaaag tggtccttag
3301 aatacataaa aactgaggca cttatgtgta tagaagtaac caacgaagaa
3351 agacactgtg agatagtaga ggctggtacc aggttcacaa ttggtccagt
3401 aaccgcaaca atttcagaca ctcaaaatat agtcaacaag ctacctacag
3451 agataatgac aatacaaaaa cttgatgact ccagatttgt agacataatg
3501 catgttagta atgtaatctc tgcagagaac agctgtaagt tacagagctg
3551 cactcatggc agtgctgggg acatacaaat ctaccacact gacaatctaa
3601 taaaaaacga ccatagcagt ggaattaacc tggctgcaat tgatccactt
3651 gttaatacta gctggctttc ctgggaaggt tgtgatatgg actacttctg
3701 taatgttggt gactggccga cctgcacata cacaggagtt gtaactcaaa
3751 atacagagag ctttgagaac cttttaaaca tagaaaagga ctatactaaa
3801 aggttcttct tccacaccaa gaggatcatg gccaattcag gtactctgca
3851 gatggatctc aaagctaggc ccaatgaagg tggaggagaa gtgacagtat
3901 tagttgaggt cgaaaatatg gagttgcact ctaagacaat taaacttgct
3951 ggtataaaga taagcaacct caaatgttct ggttgttata gctgtacttc
4001 aggcatcttg tgtagccttg ttgctagaat agacaatcca gatgaattca
4051 ttatacactt aagaagcaag gacccagatg ttgtggttgc tgacactggt
4101 atagtagcaa gaaaggggat atccaactct gctggaaaaa tacgggtctt
4151 ttctgtagca gaaaagaaga aactttgttt tgaagtggtt gaggggtctt
4201 actgcaagga ttgcagtcga gatcagttga atgtctgcac tgatgttaac
4251 ctggaaccac ctaaagatat acttctagaa cataggggga ctatagtgca
4301 gcataagaat gatacttgtt cttcgggaat agactgttgg agtaagtcta
4351 taagcagctt tgcttcaggt gtaggcattt tttttacccg atactttgga
4401 agtgtagttc taggactgct tgggacactg cttcctttta tactcgtaat
4451 catctttttc atctggggtg acaagctact aaaaccttgt tcaatattct
4501 tcaggtgttg ccgacaaagg caccatcagc ataagtattc cagcctgtca
4551 gaggaagaag aactcagaga tatagtgcgt aagttcaaca aaagtggaga
4601 gctccttgaa aaaggggaaa atgataaacg cactatagct aggttgttca
4651 tggccgatgt aaaagggaaa ggcaaaaagc taaaagaact agcttaaatc
4701 accacagtcc ataacttcat tgactaatta gagatattga tctaaacatt
4751 tattctttgc gcttctgcac taacccactt tattaacatc ttgctgtgcc
4801 gccacgctat ctttgaga