Sequence of DPV Tomato leaf curl Philippines virus
Tomato leaf curl Philippines virus - [Bukidnon 42], complete sequence.
ACC No: EU295549
Dated: 2008-04-17 | Length: 2721 | CRC: -1962336005
ID EU295549; SV 1; linear; genomic DNA; STD; VRL; 2721 BP.
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AC EU295549;
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DT 17-APR-2008 (Rel. 95, Created)
DT 17-APR-2008 (Rel. 95, Last updated, Version 1)
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DE Tomato leaf curl Philippines virus - [Bukidnon 42], complete sequence.
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KW .
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OS Tomato leaf curl Philippines virus - [Bukidnon 42]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2721
RA Sta Cruz F.C., Elvira P.R.V., Galvez H.F., Reyes M.C., Hautea D.M.;
RT "Nucleotide Sequence Variation of the Partial Genome of Philippine Tomato
RT leaf curl virus Isolates";
RL Unpublished.
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RN [2]
RP 1-2721
RA Sta Cruz F.C., Elvira P.R.V., Galvez H.F., Reyes M.C., Hautea D.M.;
RT ;
RL Submitted (23-NOV-2007) to the EMBL/GenBank/DDBJ databases.
RL NCPC-CPC and IPB-CSC, College of Agriculture, University of the Philippines
RL Los Banos, College, Los Banos, Laguna 4031, Philippines
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FH Key Location/Qualifiers
FH
FT source 1. .2721
FT /organism="Tomato leaf curl Philippines virus - [Bukidnon
FT 42]"
FT /specific_host="tomato"
FT /isolate="Bukidnon 4"
FT /mol_type="genomic DNA"
FT /country="Philippines"
FT /clone="2"
FT /db_xref="taxon:488500"
FT CDS 175. .582
FT /codon_start=1
FT /product="replication enhancer protein"
FT /note="C3"
FT /protein_id="ACB46889.1"
FT /translation="MQNSSPSQNHCTQVPIKVQHKIAKQRPIRRRRIDLPCGCSYYLGL
FT NCASYGFSHRGTHHCSSGREWRIYLDDNKSPIFQDIPTRREAVPGEPRYHNDTNTVQPQ
FT PEESVGNTSMFSDLQNLDSFTSSDLAFLKSI"
FT CDS 323. .727
FT /codon_start=1
FT /product="transcriptional activator protein"
FT /note="C2"
FT /protein_id="ACB46888.1"
FT /translation="MDSRTGGLITAAQAENGVYTWTITNPLYFKISQHDERPFLGNHDI
FT ITIQIQFNHNLRKALGIHQCFLICKIWTRLHPQTWRFLRVFKYHCMKYLDSLGVISINN
FT VIRAFDYVLYDVLEKTIDVQISHIIKFNIY"
FT CDS complement(724. .1500)
FT /codon_start=1
FT /product="viral coat protein"
FT /note="V1"
FT /protein_id="ACB46885.1"
FT /translation="MPKRSIDTVTSLPMSITRRRLNYGSQYSLPASVPTVPDMSYKRRS
FT WTYRPMYRKPKMYRMYRSRDVPRGCEGPCKVQSYEQRHDIAHVGKVICVSDVTRGNGLT
FT HRVGKRFCVKSVYVLGKVWMDENIKTKNHTNTVMFFLVRDRRPYGTPQDFGQVFNMYDN
FT EPSTATVKNDNRDRYQVLRRFQATVTGGQYASKEQAIVKKFMKINNHVTYNHQEAAKYD
FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSVQN"
FT CDS complement(1316. .1669)
FT /codon_start=1
FT /product="virus movement-associated protein"
FT /note="V2"
FT /protein_id="ACB46886.1"
FT /translation="MANMWDPLVHPFPESLHGFRCMLAIKYLQSLQGKYSPDTVGHEFL
FT KDFICILRSRNYAEAFNRYSDVVANVYNTSEAQLRESVQSPCLCPHCPRHVLQAKVVDL
FT QANVSQAQDVQNV"
FT CDS 1927. .>2721
FT /codon_start=1
FT /product="replication protein"
FT /note="C1"
FT /protein_id="ACB46887.1"
FT /translation="MAPPRQFRINAKNYFLTYPQCSLTKDVALSQLQNLETPTNKKYIK
FT ICRELHADGSPHLHVLIQFEGKFQCKNQRFFDLVSPTRSAHFHPNIQGAKSSSDVRSYI
FT NKDGDTVEWGKFQVDGRSARGGQQTANDAYAKAINTGSKSEALNVIRELAPKDYILQFH
FT NLNANLDRIFAPPLEVFVCPFLPSSFDQVPREIEEWVSENVRDAAARPWRPISIVIEGN
FT SRTGKTMWARSLGQHNYLCGHLDLSPKVYSNDAWYNVIDDVDP"
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SQ Sequence 2721 BP; 869 A; 595 C; 516 G; 724 T; 17 other;
eu295549 Length: 2721 17-APR-2008 Type: N Check: 3322 ..
1 aagaattcat tggggcccaa aaagactggc aaagcaacac gaagtacggg
51 aaacctattc aaattaaagg tggaataccc actatcttcc tctgcaatcc
101 tggtcctacg tcatcgtata aagagtactt agatgaggac aaaaatagtg
151 aactcaaaaa ctgggcacta aagaatgcag aattcatcac catcacaaaa
201 ccattgtact caggtaccca tcaaagtcca acataaaata gccaagcaga
251 gaccaatacg caggcggaga attgatcttc cgtgcggctg ctcttactat
301 ttaggactta attgcgcgtc atatggattc tcgcacaggg ggactcatca
351 ctgcagctca ggcagagaat ggcgtatata cctggacgat aacaaatccc
401 ctatatttca agatatccca acacgacgag aggccgttcc tggggaacca
451 cgatatcata acgatacaaa tacagttcaa ccacaacctg aggaaagcgt
501 tgggaataca tcaatgtttt ctgatctgca aaatctggac tcgtttacat
551 cctcagactt ggcgtttctt aagagtattt aaatatcatt gtatgaagta
601 tttagatagt ttaggagtta ttagcataaa caatgtaatt agagcattcg
651 actatgtact atacgatgta cttgaaaaaa caatcgatgt acaaatttct
701 catataataa aattcaatat ttattaattt tgaacagaat catagaaata
751 gattctgatc ttcaacgtag catacactgg attactagca tgagtacatg
801 ccatatacaa caacaaggca ttttctgtgt ggttatcgta cttcgcagcc
851 tcctgatgat tgtaagtgac atggttgtta atcttcatga acttcttaac
901 tattgcttgc tccttgcttg catactgacc tcccgttaca gtagcttgaa
951 atctacgaag aacctgatat cgatctctat tatcattttt tacagtggca
1001 gtactaggct cattatcata catgttaaaa acctgaccaa aatcctgggg
1051 agtcccatat ggcctcctat cacgtactaa aaaaaacatg acagtgttag
1101 tatgattctt agtcttgatg ttctcatcca tccagacctt ccccaacaca
1151 tacacagact ttacacaaaa cctctttcca acacgatgtg taagcccatt
1201 accacgagtg acgtcagaaa cacatatgac cttacccaca tgggctatat
1251 catggcgctg ctcataggac tgaaccttac acgggccttc acacccacga
1301 ggaacatcac ggcttctata cattctgtac atcttgggct tgcgatacat
1351 tggcctgtaa gtccacgacc ttcgcttgta agacatgtct gggacagtgg
1401 ggacagaggc agggagactg tactgactcc cgtaattgag cctccgacgt
1451 gttatagaca ttggcaacga cgtcactgta tctattgaac gcttcggcat
1501 aattcctact acgcaaaata catataaaat ctttcaaaaa ctcatgccca
1551 acagtatccg gagaatattt accctgtaag ctttgaagat atttgatggc
1601 aagcatacat ctaaagccgt gcaagctttc agggaagggg tgaactagag
1651 gatcccacat gttcgccatt acctataaag aaaactcttt tatggtgcag
1701 aatgcacttt aaatagctgt caaggtccaa tatgattggt taaaaaaaag
1751 gcgcgtccca cggtaatatt annnnnnnnn nnnnnnnnac tatacgtggg
1801 acgcgtgtga aatcttggaa aaaattacaa taatgccatt tagtgtctat
1851 gtataaataa gaccccagac accgattact atagaaagat gaaatcctct
1901 caattggtgt ccattgacta attcaaatgg cacctcccag acaatttcga
1951 ataaatgcca aaaattattt cctcacttat ccacaatgct ctcttactaa
2001 agacgtagca ctttcccaat tacaaaacct agaaacacca acaaataaaa
2051 aatacatcaa aatctgcaga gaactgcacg cagatgggag ccctcatctc
2101 catgtgctca tccagttcga agggaagttc caatgcaaga atcaaagatt
2151 cttcgatttg gtatccccaa ccagatcagc acatttccat ccaaacattc
2201 agggagctaa atcaagttcc gatgtcagat cctatattaa taaagacgga
2251 gacaccgtcg aatggggtaa gtttcaggtc gacggaagat ctgctagagg
2301 gggtcaacaa acagccaatg atgcttacgc caaagcaatt aacacaggaa
2351 gtaagtcgga ggctcttaat gtaattagag aattagcccc taaagattat
2401 attttacaat ttcacaattt aaatgcgaat ttagatagga tttttgcacc
2451 tcctttagag gtttttgttt gtccttttct tccttcttct ttcgatcaag
2501 ttccaagaga aattgaagaa tgggtttccg agaatgtcag ggatgccgct
2551 gcgcggcctt ggaggcccat aagtattgta attgagggca atagtagaac
2601 aggaaagacg atgtgggcta gatctctggg ccaacacaat tacctgtgcg
2651 gacatctgga cctaagccca aaggtttaca gcaatgatgc ttggtataac
2701 gtcattgatg acgtcgaccc c