Sequence of DPV Iris yellow spot virus

Iris yellow spot virus isolate IYSV-On-Drd nucleocapsid protein (N) gene, complete cds.

ACC No: EU310290

Dated: 2011-02-27 | Length: 822 | CRC: 2110584116

                
ID   EU310290; SV 1; linear; genomic RNA; STD; VRL; 822 BP.
XX
AC   EU310290;
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DT   01-APR-2008 (Rel. 95, Created)
DT   27-FEB-2011 (Rel. 108, Last updated, Version 2)
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DE   Iris yellow spot virus isolate IYSV-On-Drd nucleocapsid protein (N) gene,
DE   complete cds.
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KW   .
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OS   Iris yellow spot virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-822
RX   PUBMED; 21299415.
RA   Kunkalikar S.R., Poojari S., Arun B.M., Rajagopalan P.A., Chen T.C.,
RA   Yeh S.D., Naidu R.A., Zehr U.B., Ravi K.S.;
RT   "Importance and genetic diversity of vegetable-infecting tospoviruses in
RT   India";
RL   Phytopathology 101(3):367-376(2011).
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RN   [2]
RP   1-822
RA   Ravi K.S., Kunkalikar S.R., Sudarsana P., Rajagopalan P.A., Zehr U.B.,
RA   Naidu R.A.;
RT   ;
RL   Submitted (30-NOV-2007) to the EMBL/GenBank/DDBJ databases.
RL   Molecular Virology, Mahyco Life Science Research Center, Dawalwadi, Jalna,
RL   Maharashtra 431203, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .822
FT                   /organism="Iris yellow spot virus"
FT                   /host="onion"
FT                   /isolate="IYSV-On-Drd"
FT                   /mol_type="genomic RNA"
FT                   /country="India"
FT                   /note="PCR_primers=fwd_name: MhMVLINF, rev_name: MhMVLINR"
FT                   /db_xref="taxon:60456"
FT   gene            1. .822
FT                   /gene="N"
FT   CDS             1. .822
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:B2C7S3"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:B2C7S3"
FT                   /protein_id="ACA09436.1"
FT                   /translation="MFTVRVKPSEIEKFLSGGDADVVIESDETVGFNFKNFVLSNEGVQ
FT                   MTFNNGYTILRNRAGIYKTIKSGKFTFQGKTIVIPSANVSPNQDDWTFRRLEGFIRAKM
FT                   LVELIETKNEKEKQKMYEKICGLPLVSAYGLKPSSKFDATTAKIMLTLGGPLTLLASLD
FT                   IFAATALPLAYFQNVKKEALGISRFSTYEQLCKVARVMAAKEFKFTEKYKKVFDETVKI
FT                   LADCTPGTSGAASLIKFNEQIKILEGAFGKIVEDIGESSKPKNPSKKDRYN"
XX
SQ   Sequence 822 BP; 276 A; 145 C; 178 G; 223 T; 0 other;

eu310290 Length: 822  27-FEB-2011  Type: N  Check: 8214  ..

       1  atgtttaccg ttagggtgaa accttcagaa atcgagaaat ttctgtctgg
      51  cggagatgcg gatgtggtga ttgaatctga tgagactgta gggttcaatt
     101  tcaagaattt tgtgttgtca aatgaaggtg tccaaatgac attcaataat
     151  ggctacacaa ttcttagaaa cagagcaggc atttacaaga caataaaatc
     201  agggaaattc acattccaag gaaagaccat cgttattcct agtgctaatg
     251  ttagtcccaa tcaagacgat tggacattca ggaggttgga aggcttcatc
     301  agagccaaaa tgctcgtaga actgattgaa acaaagaatg aaaaagagaa
     351  gcagaaaatg tatgaaaaaa tctgcgggct tcctctggtg agcgcatatg
     401  gtttaaagcc tagtagcaag tttgatgcaa ctacagctaa gatcatgctg
     451  acactaggtg gtcctctcac tttgctagca agtcttgaca tctttgctgc
     501  aactgctctt ccattagctt atttccagaa tgtcaaaaaa gaagcactcg
     551  gtataagcag attctcaact tatgagcaac tctgtaaagt tgcaagagtc
     601  atggcagcaa aggaattcaa attcacagag aaatacaaaa aggtttttga
     651  tgaaactgta aagattcttg ctgactgcac tcctggaact tcgggtgctg
     701  cttcattgat caaattcaat gaacagatta aaattcttga aggtgctttt
     751  ggaaagattg ttgaagacat tggtgagtct tctaaaccca aaaatccctc
     801  taagaaggac agatacaact ag