Sequence of DPV Iris yellow spot virus

Iris yellow spot virus isolate IYSV-On-Ujj.1 nucleocapsid protein (N) gene, complete cds.

ACC No: EU310300

Dated: 2011-02-27 | Length: 822 | CRC: -669205815

                
ID   EU310300; SV 1; linear; genomic RNA; STD; VRL; 822 BP.
XX
AC   EU310300;
XX
DT   01-APR-2008 (Rel. 95, Created)
DT   27-FEB-2011 (Rel. 108, Last updated, Version 2)
XX
DE   Iris yellow spot virus isolate IYSV-On-Ujj.1 nucleocapsid protein (N) gene,
DE   complete cds.
XX
KW   .
XX
OS   Iris yellow spot virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
XX
RN   [1]
RP   1-822
RX   PUBMED; 21299415.
RA   Kunkalikar S.R., Poojari S., Arun B.M., Rajagopalan P.A., Chen T.C.,
RA   Yeh S.D., Naidu R.A., Zehr U.B., Ravi K.S.;
RT   "Importance and genetic diversity of vegetable-infecting tospoviruses in
RT   India";
RL   Phytopathology 101(3):367-376(2011).
XX
RN   [2]
RP   1-822
RA   Ravi K.S., Kunkalikar S.R., Sudarsana P., Rajagopalan P.A., Zehr U.B.,
RA   Naidu R.A.;
RT   ;
RL   Submitted (30-NOV-2007) to the EMBL/GenBank/DDBJ databases.
RL   Molecular Virology, Mahyco Life Science Research Center, Dawalwadi, Jalna,
RL   Maharashtra 431203, India
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .822
FT                   /organism="Iris yellow spot virus"
FT                   /host="onion"
FT                   /isolate="IYSV-On-Ujj.1"
FT                   /mol_type="genomic RNA"
FT                   /country="India"
FT                   /note="PCR_primers=fwd_name: MhMVLINF, rev_name: MhMVLINR"
FT                   /db_xref="taxon:60456"
FT   gene            1. .822
FT                   /gene="N"
FT   CDS             1. .822
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:B2C7R9"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:B2C7R9"
FT                   /protein_id="ACA09446.1"
FT                   /translation="MSTVRVKPSEIEKLLSGGDADVVIESDETEGFNFKNFVLSNEGVQ
FT                   MTFNNGYTILRNRAGIYKTIKSGKFTFQGKNIVIPSANVSPNQDDWTFRRLEGFIRAKM
FT                   LVELIETKNEKEKQKMYEKICGLPLVSAYGLKPSSKFDATTAKIMLTLGGPLTLLASLD
FT                   IFAATALPLAYFQNVKKEALGISRFSTYEQLCKVARVMAAKEFKFTEKYKKVFDETVKI
FT                   LADCTPGTSGAASLIKFNEQIKILEGAFGKIVEDIGEPSKPKNPSKKDRYN"
XX
SQ   Sequence 822 BP; 280 A; 149 C; 177 G; 216 T; 0 other;

eu310300 Length: 822  27-FEB-2011  Type: N  Check: 4389  ..

       1  atgtctaccg ttagggtgaa accgtcagaa atcgagaaac ttctgtctgg
      51  cggagatgcg gatgtggtga ttgaatctga tgagactgaa ggattcaatt
     101  tcaagaattt tgtgttgtca aacgaaggtg tccaaatgac attcaataat
     151  ggctacacaa ttcttagaaa cagagcaggc atttacaaga caataaaatc
     201  agggaaattc acattccaag gaaagaacat tgtcattcct agtgctaatg
     251  ttagtcccaa tcaagacgat tggacattca ggaggttgga aggctttatc
     301  agagccaaaa tgctcgtaga actgattgaa acaaagaatg aaaaagagaa
     351  gcagaaaatg tatgaaaaaa tctgcgggct tcctctggtg agcgcatatg
     401  gtttaaagcc tagcagcaag tttgatgcaa ctacagctaa gatcatgctg
     451  acactaggtg gtcctctcac tttgttagca agtcttgaca tctttgctgc
     501  gactgctctt ccattagctt atttccagaa tgtcaaaaaa gaagcactcg
     551  gtataagcag attctcaact tatgagcaac tctgtaaagt tgcaagagtc
     601  atggcagcaa aggaattcaa attcacagag aaatacaaaa aggtttttga
     651  tgaaactgta aaaatcctcg ctgactgcac tcctggaact tcaggtgctg
     701  cctcattgat caagttcaat gaacagatta aaattcttga aggtgctttt
     751  ggaaagattg ttgaagacat tggtgagcct tctaaaccca aaaatccctc
     801  taagaaagac agatataact ag