Sequence of DPV Tobacco etch virus

Tobacco etch virus isolate CT8 viral protein genome-linked protein mRNA, partial cds.

ACC No: EU334787

Dated: 2008-01-20 | Length: 564 | CRC: 143667942

                
ID   EU334787; SV 1; linear; mRNA; STD; VRL; 564 BP.
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AC   EU334787;
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DT   20-JAN-2008 (Rel. 94, Created)
DT   20-JAN-2008 (Rel. 94, Last updated, Version 1)
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DE   Tobacco etch virus isolate CT8 viral protein genome-linked protein mRNA,
DE   partial cds.
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KW   .
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OS   Tobacco etch virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-564
RA   Janzac B., Moury B.;
RT   "Does evolution and diversity of virus avirulence factors predict
RT   durability of the corresponding plant resistance?";
RL   Unpublished.
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RN   [2]
RP   1-564
RA   Janzac B., Moury B.;
RT   ;
RL   Submitted (11-DEC-2007) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, INRA, Domaine St-Maurice, Montfavet F-84143, France
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FH   Key             Location/Qualifiers
FH
FT   source          1. .564
FT                   /organism="Tobacco etch virus"
FT                   /specific_host="Capsicum sp."
FT                   /isolate="CT8"
FT                   /mol_type="mRNA"
FT                   /country="Venezuela"
FT                   /collection_date="2006"
FT                   /db_xref="taxon:12227"
FT   CDS             <1. .>564
FT                   /codon_start=1
FT                   /product="viral protein genome-linked protein"
FT                   /note="VPg; cleaved from the Nia (nuclear inclusion a)
FT                   protein"
FT                   /protein_id="ABY67225.1"
FT                   /translation="GKKNQKHKLKMREARGARGQYEVAAEPEALEHYFGSAYNNKGKRK
FT                   GTTRGMGAKSRKFINMYGFDPTDFSYIRFVDPLTGHTIDESTNAPIDLVQHEFGKVRTR
FT                   MLLDDDIEPQSLRTHTTIHAYLVNSGTKKVLKVDLTPHSSLRASEKSTAIMGFPEREDE
FT                   LRQTGMAVPVAYDQLPPKNEDLTFE"
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SQ   Sequence 564 BP; 185 A; 106 C; 147 G; 126 T; 0 other;

eu334787 Length: 564  20-JAN-2008  Type: N  Check: 3176  ..

       1  gggaagaaaa atcagaagca taagcttaag atgagagagg cgcgtggggc
      51  tagagggcaa tatgaggttg cagcggaacc ggaggcgtta gaacattact
     101  ttggaagtgc atataataac aaaggaaagc gcaagggcac cacgagaggg
     151  atgggtgcaa agtcccggaa attcataaac atgtatgggt ttgatccaac
     201  tgatttctcc tacattaggt ttgtagatcc attgacaggt cacactattg
     251  atgagtccac aaacgcaccc attgatttag tgcagcatga gtttggaaag
     301  gttagaacac gcatgttact tgacgatgat atagaacctc aaagtcttag
     351  aacccacaca acaatccacg cttatttggt gaatagtggc acgaagaaag
     401  ttctgaaggt tgatttaaca ccacattcgt cgctacgcgc aagtgagaaa
     451  tcaacagcaa taatgggatt tcctgaaagg gaggatgaac tgcgtcaaac
     501  cggcatggca gtgccagtgg cttatgatca attgccacca aagaatgagg
     551  acttgacgtt cgaa