Sequence of DPV Tobacco etch virus

Tobacco etch virus isolate VM10 viral protein genome-linked protein mRNA, partial cds.

ACC No: EU334792

Dated: 2008-01-20 | Length: 564 | CRC: 1040757751

                
ID   EU334792; SV 1; linear; mRNA; STD; VRL; 564 BP.
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AC   EU334792;
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DT   20-JAN-2008 (Rel. 94, Created)
DT   20-JAN-2008 (Rel. 94, Last updated, Version 1)
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DE   Tobacco etch virus isolate VM10 viral protein genome-linked protein mRNA,
DE   partial cds.
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KW   .
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OS   Tobacco etch virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-564
RA   Janzac B., Moury B.;
RT   "Does evolution and diversity of virus avirulence factors predict
RT   durability of the corresponding plant resistance?";
RL   Unpublished.
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RN   [2]
RP   1-564
RA   Janzac B., Moury B.;
RT   ;
RL   Submitted (11-DEC-2007) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, INRA, Domaine St-Maurice, Montfavet F-84143, France
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FH   Key             Location/Qualifiers
FH
FT   source          1. .564
FT                   /organism="Tobacco etch virus"
FT                   /specific_host="Capsicum sp."
FT                   /isolate="VM10"
FT                   /mol_type="mRNA"
FT                   /country="Mexico"
FT                   /collection_date="2006"
FT                   /db_xref="taxon:12227"
FT   CDS             <1. .>564
FT                   /codon_start=1
FT                   /product="viral protein genome-linked protein"
FT                   /note="VPg; cleaved from the Nia (nuclear inclusion a)
FT                   protein"
FT                   /protein_id="ABY67230.1"
FT                   /translation="EKKNQKHKLKMREARGARGQYEVAAEPEALEHYFGSAYNNKGKRK
FT                   GTTRGMGAKSRKFINMYGFDPTDFSYIRFVDPLTGHTIDESTNAPIDLVQHEFGKVRTR
FT                   MLLDDELEHQDLSTHTTIHAYLVNSGTKKVLKVDLTPHSSLRASEKSTAIMGFPERENE
FT                   LRQTGMAVPVAYDKLPPKNEDLTFE"
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SQ   Sequence 564 BP; 187 A; 104 C; 147 G; 126 T; 0 other;

eu334792 Length: 564  20-JAN-2008  Type: N  Check: 4707  ..

       1  gagaagaaga atcagaagca caagctcaag atgagagagg cgcgtggggc
      51  tagaggacaa tatgaagttg cagcggagcc agaggcgcta gagcattact
     101  ttggaagtgc atacaacaac aaaggaaagc gcaaaggcac cacgagagga
     151  atgggtgcaa aatctcggaa attcataaac atgtatgggt ttgatccaac
     201  tgatttttca tacatcaggt ttgtggatcc attgacaggt cacactattg
     251  atgagtcaac aaacgcaccc attgatttgg tgcagcatga gtttggaaag
     301  gttagaacac gcatgttact tgatgatgag ttagagcatc aggatcttag
     351  cacccacact acaatccatg cttatttggt gaatagtggc acgaagaagg
     401  tcttgaaggt tgatttgaca ccacattcgt cactgcgagc gagtgagaaa
     451  tcaacagcaa taatgggatt ccctgaaaga gaaaatgagc tgcgtcaaac
     501  cggcatggca gtcccagtgg cttatgataa attgccacca aagaatgaag
     551  atttgacatt tgag