Sequence of DPV Watermelon bud necrosis virus

Watermelon bud necrosis virus isolate Wm-Jln.L nucleocapsid (N) gene, complete cds.

ACC No: EU373749

Dated: 2008-07-02 | Length: 828 | CRC: -1680994291

                
ID   EU373749; SV 1; linear; viral cRNA; STD; VRL; 828 BP.
XX
AC   EU373749;
XX
DT   02-JUL-2008 (Rel. 96, Created)
DT   02-JUL-2008 (Rel. 96, Last updated, Version 1)
XX
DE   Watermelon bud necrosis virus isolate Wm-Jln.L nucleocapsid (N) gene,
DE   complete cds.
XX
KW   .
XX
OS   Watermelon bud necrosis virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
XX
RN   [1]
RP   1-828
RA   Ravi K.S., Kunkalikar S.R., Sudarsana P., Rajagopalan P.A., Zehr U.B.,
RA   Naidu R.A.;
RT   "Nucleocapsid Protein Diversity and Molecular Characterization of Small RNA
RT   of Watermelon Bud Necrosis Virus from India";
RL   Unpublished.
XX
RN   [2]
RP   1-828
RA   Ravi K.S., Kunkalikar S.R., Sudarsana P., Rajagopalan P.A., Zehr U.B.,
RA   Naidu R.A.;
RT   ;
RL   Submitted (04-JAN-2008) to the EMBL/GenBank/DDBJ databases.
RL   Molecular Virology, Mahyco Life Science Research Center, Dawalwadi, Jalna,
RL   Maharashtra 431203, India
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .828
FT                   /organism="Watermelon bud necrosis virus"
FT                   /specific_host="watermelon"
FT                   /isolate="Wm-Jln.L"
FT                   /mol_type="viral cRNA"
FT                   /country="India"
FT                   /note="serogroup: WSMoV; PCR_primers=fwd_name: MhMVL-F,
FT                   rev_name: MhMVL-R"
FT                   /db_xref="taxon:76052"
FT   gene            1. .828
FT                   /gene="N"
FT   CDS             1. .828
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid"
FT                   /protein_id="ACB12334.1"
FT                   /translation="MSNVKQRTDKKIKDLLAGGAADVEIETEDATPGFSFKSFYDNNKD
FT                   VEITFTTCLNILKCRKQIFTACKNGKYNFCGKNIVATTAQVGPDDWTFKRTEAFIRTKM
FT                   VSMVEKSTNENAKQEMYTKIMELPLVAAYGLNVPAAYDSCALRMMLCIGGPLPLLSSLK
FT                   GLAPVIFPLAYYQNVKKEKLGIKNFSTYEQVCKVAKVLSASQIEFKGEMDNMFKSAVEL
FT                   LSKSNPGTASSISLKKYDDQVKYMDRIFNSSLSMDDYGEHSKKSSKAGPSLEV"
XX
SQ   Sequence 828 BP; 276 A; 145 C; 179 G; 228 T; 0 other;

eu373749 Length: 828  02-JUL-2008  Type: N  Check: 1904  ..

       1  atgtctaacg ttaagcaacg aaccgacaag aaaatcaaag acttgttggc
      51  tggtggtgcc gctgatgttg aaattgaaac cgaagatgca acacctggat
     101  tcagttttaa atctttctac gataataata aagatgttga aataactttc
     151  acaacctgct tgaatatctt aaagtgcaga aagcagatct ttactgcttg
     201  caagaatggg aaatataatt tctgtgggaa aaatatcgtc gcaacaactg
     251  ctcaggtagg ccctgacgat tggactttta aaaggacaga agctttcatc
     301  agaacaaaga tggttagtat ggtggagaaa agtactaatg aaaacgccaa
     351  acaagagatg tatacaaaaa taatggaact gccattggtg gcagcctacg
     401  gcttgaatgt tcctgcagct tatgattcat gtgctctaag aatgatgtta
     451  tgtattggag gtcctttacc tctcctatct agtttgaaag ggctagcccc
     501  agtcatattt cctttagctt attatcaaaa tgtgaaaaaa gagaagctag
     551  gcataaaaaa cttttctact tatgaacagg tgtgcaaagt agctaaagtt
     601  ctttctgcct cacaaattga gttcaaggga gaaatggata atatgttcaa
     651  atcagctgtt gagttgctca gcaagagtaa cccaggaaca gctagttcaa
     701  tctctctgaa gaaatatgat gaccaggtta aatacatgga caggatcttc
     751  aattctagtc tgtccatgga tgactatggt gagcactcta agaagagctc
     801  aaaggctggc ccttcgctgg aagtgtaa