Sequence of DPV Watermelon bud necrosis virus

Watermelon bud necrosis virus isolate Wm-Pur nucleocapsid (N) gene, complete cds.

ACC No: EU373761

Dated: 2011-02-27 | Length: 828 | CRC: 1488979042

                
ID   EU373761; SV 1; linear; viral cRNA; STD; VRL; 828 BP.
XX
AC   EU373761;
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DT   02-JUL-2008 (Rel. 96, Created)
DT   27-FEB-2011 (Rel. 108, Last updated, Version 2)
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DE   Watermelon bud necrosis virus isolate Wm-Pur nucleocapsid (N) gene,
DE   complete cds.
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KW   .
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OS   Watermelon bud necrosis virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-828
RX   PUBMED; 21299415.
RA   Kunkalikar S.R., Poojari S., Arun B.M., Rajagopalan P.A., Chen T.C.,
RA   Yeh S.D., Naidu R.A., Zehr U.B., Ravi K.S.;
RT   "Importance and genetic diversity of vegetable-infecting tospoviruses in
RT   India";
RL   Phytopathology 101(3):367-376(2011).
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RN   [2]
RP   1-828
RA   Ravi K.S., Kunkalikar S.R., Sudarsana P., Rajagopalan P.A., Zehr U.B.,
RA   Naidu R.A.;
RT   ;
RL   Submitted (04-JAN-2008) to the EMBL/GenBank/DDBJ databases.
RL   Molecular Virology, Mahyco Life Science Research Center, Dawalwadi, Jalna,
RL   Maharashtra 431203, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .828
FT                   /organism="Watermelon bud necrosis virus"
FT                   /host="watermelon"
FT                   /isolate="Wm-Pur"
FT                   /mol_type="viral cRNA"
FT                   /country="India"
FT                   /note="serogroup: WSMoV; PCR_primers=fwd_name: MhMVL-F,
FT                   rev_name: MhMVL-R"
FT                   /db_xref="taxon:76052"
FT   gene            1. .828
FT                   /gene="N"
FT   CDS             1. .828
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid"
FT                   /db_xref="GOA:B3TQ52"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:B3TQ52"
FT                   /protein_id="ACB12346.1"
FT                   /translation="MSTVKQLTDKKIKDLLAGGAADIEIETEDATPGFSFKSFYDNNKD
FT                   VEITFTTCLNILKCRKQIFTACKNGKYNFCGKNIVATTAQVGPDDWTFKRTEAFIRTKM
FT                   VSMVEKSTNENAKQEMYTKVMELPLVAAYGLNVPAAYDSCALRMMLCIGGPLPLLSSVK
FT                   GLAPVIFPLAYYQNVKKEKLGIKNFSTYEQVCKVAKVLSASQIEFKGELDNMFKSAVEL
FT                   LSKSNPGTASSISLKKYDDQVKYMDRIFNASLSMDDYGEHSKKSSKAGPSLEL"
XX
SQ   Sequence 828 BP; 277 A; 143 C; 175 G; 233 T; 0 other;

eu373761 Length: 828  27-FEB-2011  Type: N  Check: 1485  ..

       1  atgtctaccg ttaagcaact caccgacaag aaaatcaaag acttgttggc
      51  tggtggtgct gctgatattg aaattgaaac cgaagatgca acacctgggt
     101  tcagttttaa atctttctat gacaataata aggatgttga aataactttt
     151  acaacctgct taaatatctt aaagtgcaga aagcagatct ttactgcttg
     201  caagaatggg aaatacaatt tctgcgggaa aaatattgtt gcaacaactg
     251  ctcaagtagg ccctgatgat tggactttta aaagaacaga agcttttatc
     301  agaacaaaga tggttagtat ggtagagaaa agcactaatg aaaatgccaa
     351  acaagagatg tacacaaaag taatggaatt gccattggtg gcagcttatg
     401  gattgaatgt tcctgcagct tatgattcgt gtgctctaag aatgatgctg
     451  tgtattggag gtcctttacc tctcctatcc agtgtgaaag ggctggcacc
     501  agtcatattc cctctagctt attatcaaaa tgtgaaaaaa gagaagttag
     551  gcattaaaaa cttctctact tatgaacagg tgtgtaaagt agctaaagtt
     601  ctttctgctt cgcaaatcga gtttaaaggc gaactggaca atatgttcaa
     651  atcagctgtt gagttgctca gcaagagtaa cccaggaaca gccagttcaa
     701  tctctctaaa gaaatatgat gaccaagtca aatacatgga cagaattttt
     751  aatgctagtc tttcaatgga tgattacggt gagcactcta agaaaagctc
     801  aaaggctggc ccttcgctgg aattgtaa