Sequence of DPV Groundnut bud necrosis virus

Groundnut bud necrosis virus isolate To-Dan nucleocapsid (N) gene, complete cds.

ACC No: EU373773

Dated: 2011-02-27 | Length: 831 | CRC: 2022353011

                
ID   EU373773; SV 1; linear; viral cRNA; STD; VRL; 831 BP.
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AC   EU373773;
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DT   02-JUL-2008 (Rel. 96, Created)
DT   27-FEB-2011 (Rel. 108, Last updated, Version 2)
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DE   Groundnut bud necrosis virus isolate To-Dan nucleocapsid (N) gene, complete
DE   cds.
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KW   .
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OS   Groundnut bud necrosis virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-831
RX   PUBMED; 21299415.
RA   Kunkalikar S.R., Poojari S., Arun B.M., Rajagopalan P.A., Chen T.C.,
RA   Yeh S.D., Naidu R.A., Zehr U.B., Ravi K.S.;
RT   "Importance and genetic diversity of vegetable-infecting tospoviruses in
RT   India";
RL   Phytopathology 101(3):367-376(2011).
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RN   [2]
RP   1-831
RA   Ravi K.S., Kunkalikar S.R., Sudarsana P., Rajagopalan P.A., Zehr U.B.,
RA   Naidu R.A.;
RT   ;
RL   Submitted (06-JAN-2008) to the EMBL/GenBank/DDBJ databases.
RL   Molecular Virology, Mahyco Life Science Research Center, Dawalwadi, Jalna,
RL   Maharashtra 431203, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .831
FT                   /organism="Groundnut bud necrosis virus"
FT                   /host="tomato"
FT                   /isolate="To-Dan"
FT                   /mol_type="viral cRNA"
FT                   /country="India"
FT                   /note="serogroup: WSMoV; PCR_primers=fwd_name: MhMVL-F,
FT                   rev_name: MhMVL-R"
FT                   /db_xref="taxon:198612"
FT   gene            1. .831
FT                   /gene="N"
FT   CDS             1. .831
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid"
FT                   /db_xref="GOA:B3TQ64"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:B3TQ64"
FT                   /protein_id="ACB12358.1"
FT                   /translation="MSNVKQLTEKKIKELLAGGSADVEIETEDSTPGFSFKAFYDANKT
FT                   LEITFTNCLNILKCRKQIFAACKSGKYVFCGKTIVATNTDVGPDDWTFKRTEAFIRTKM
FT                   ASMVEKSKNDAAKQEMYNKIMELPLVAAYGLNVPASFDTCALRMMLCIGGPLPLLSSMT
FT                   GLAPIIFPLAYYQNVKKEKLGIKNFSTYEQVCKVAKVLSASQIEFKNELEEMFKSAVKL
FT                   LSESNPGTASSISLKKYDEQVKYMDKAFSASLSVDDYGEHSKKKSSKAGPSLEL"
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SQ   Sequence 831 BP; 273 A; 146 C; 176 G; 236 T; 0 other;

eu373773 Length: 831  27-FEB-2011  Type: N  Check: 2738  ..

       1  atgtctaacg tcaagcaact caccgagaag aaaatcaaag aacttctggc
      51  tggtggctct gcagatgtcg aaattgaaac agaagattcc actcccggat
     101  ttagctttaa agctttctat gacgctaaca aaactcttga aataactttt
     151  acaaactgtt tgaatatttt gaagtgcagg aagcagatct ttgctgcttg
     201  caaaagtggt aagtatgttt tttgtggtaa aactattgtt gctacaaata
     251  ctgacgtagg gccagatgac tggaccttca aaaggacaga agctttcatc
     301  agaaccaaaa tggctagtat ggttgaaaag agcaagaatg atgctgctaa
     351  gcaagagatg tacaataaaa taatggaatt accattagtg gcagcttatg
     401  gattaaatgt ccctgcatct ttcgatacat gtgctttgag gatgatgctc
     451  tgcattggag gtcctttgcc tctcttgtct agcatgactg gtctggcacc
     501  aatcatattc cctctagctt attatcaaaa tgtgaagaaa gagaaattag
     551  gaattaagaa cttttctact tatgagcagg tttgcaaagt agccaaagta
     601  ctttctgctt cacagattga attcaaaaat gaactagagg aaatgtttaa
     651  atcagctgta aagctattga gtgagagcaa ccctggaaca gccagctcta
     701  tctcactcaa gaaatatgat gaacaagtca aatatatgga caaagctttc
     751  agtgccagtc tctcagtgga tgattatggt gaacattcta agaagaagag
     801  ttcaaaggct ggtccttcgc tggaattgta a