Sequence of DPV Groundnut bud necrosis virus

Groundnut bud necrosis virus isolate To-Meh nucleocapsid (N) gene, complete cds.

ACC No: EU373785

Dated: 2011-02-27 | Length: 831 | CRC: 674883418

                
ID   EU373785; SV 1; linear; viral cRNA; STD; VRL; 831 BP.
XX
AC   EU373785;
XX
DT   02-JUL-2008 (Rel. 96, Created)
DT   27-FEB-2011 (Rel. 108, Last updated, Version 2)
XX
DE   Groundnut bud necrosis virus isolate To-Meh nucleocapsid (N) gene, complete
DE   cds.
XX
KW   .
XX
OS   Groundnut bud necrosis virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
XX
RN   [1]
RP   1-831
RX   PUBMED; 21299415.
RA   Kunkalikar S.R., Poojari S., Arun B.M., Rajagopalan P.A., Chen T.C.,
RA   Yeh S.D., Naidu R.A., Zehr U.B., Ravi K.S.;
RT   "Importance and genetic diversity of vegetable-infecting tospoviruses in
RT   India";
RL   Phytopathology 101(3):367-376(2011).
XX
RN   [2]
RP   1-831
RA   Ravi K.S., Kunkalikar S.R., Sudarsana P., Rajagopalan P.A., Zehr U.B.,
RA   Naidu R.A.;
RT   ;
RL   Submitted (06-JAN-2008) to the EMBL/GenBank/DDBJ databases.
RL   Molecular Virology, Mahyco Life Science Research Center, Dawalwadi, Jalna,
RL   Maharashtra 431203, India
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .831
FT                   /organism="Groundnut bud necrosis virus"
FT                   /host="tomato"
FT                   /isolate="To-Meh"
FT                   /mol_type="viral cRNA"
FT                   /country="India"
FT                   /note="serogroup: WSMoV; PCR_primers=fwd_name: MhMVL-F,
FT                   rev_name: MhMVL-R"
FT                   /db_xref="taxon:198612"
FT   gene            1. .831
FT                   /gene="N"
FT   CDS             1. .831
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid"
FT                   /db_xref="GOA:B3TQ76"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:B3TQ76"
FT                   /protein_id="ACB12370.1"
FT                   /translation="MSTVKQLTEKKIKELLAGGSADVEIETEDSTPGFSFKAFYDANKT
FT                   LEITFTNCLNILKCRKQIFAACKSGKYVFCGKTIVATNTDVGPDDWTFKRTEAFIRTKM
FT                   ASMVEKSKNDAAKQEMYNKIMELPLVAAYGLNVPASFDTCALRMMLCIGGPLPLLSSMT
FT                   GLAPIIFPLAYYQNVKKEKLGIKNFSTYEQVCKVAKVLSASQIEFKNELEEMFKSAVKL
FT                   LSESNPGTASSISLKKYDEQVKYMDKAFSASLSMDDYGEHSKKKSSKAGTSLEL"
XX
SQ   Sequence 831 BP; 274 A; 143 C; 176 G; 238 T; 0 other;

eu373785 Length: 831  27-FEB-2011  Type: N  Check: 4066  ..

       1  atgtctaccg ttaagcaact caccgagaag aaaatcaaag aacttttggc
      51  tggtggctct gcagatgttg aaattgaaac agaagattcc actcccggat
     101  ttagctttaa agctttctat gacgctaata aaactcttga aataactttc
     151  acaaactgtt tgaatatttt gaagtgcagg aagcagatct ttgctgcttg
     201  taaaagtggt aagtatgttt tttgtggtaa aactattgtt gccacaaata
     251  ctgatgtagg gccagatgac tggaccttca aaaggacaga agctttcatc
     301  aggaccaaaa tggctagtat ggttgaaaag agcaagaatg atgctgccaa
     351  gcaggagatg tacaataaaa taatggaatt accattagtg gcagcttatg
     401  gattaaatgt ccctgcatct ttcgatacat gtgctttaag gatgatgctc
     451  tgcattggag gtcctctgcc tcttttgtct agcatgacag gtctggcacc
     501  aattatattc cctctggctt attatcaaaa tgtgaagaaa gagaaattag
     551  gaattaagaa cttttctact tatgaacagg tttgcaaagt agccaaagta
     601  ctttctgctt cacagattga atttaaaaat gaactagagg aaatgtttaa
     651  atcagctgta aagctattga gtgagagcaa ccctggaaca gccagctcta
     701  tctcactcaa gaaatatgat gaacaagtca aatacatgga caaagctttc
     751  agtgccagtc tctcaatgga tgattatggt gaacattcta agaagaagag
     801  ttcaaaggct ggcacttcgc tggaattgta a