Sequence of DPV Sweet potato chlorotic fleck virus
Sweet potato chlorotic fleck virus isolate TN340 coat protein (CP) and nucleic acid binding protein (NaBP) genes, complete cds.
ACC No: EU375898
Dated: 2008-12-24 | Length: 1337 | CRC: -1806617564
ID EU375898; SV 1; linear; genomic RNA; STD; VRL; 1337 BP.
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AC EU375898;
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DT 24-DEC-2008 (Rel. 98, Created)
DT 24-DEC-2008 (Rel. 98, Last updated, Version 1)
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DE Sweet potato chlorotic fleck virus isolate TN340 coat protein (CP) and
DE nucleic acid binding protein (NaBP) genes, complete cds.
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KW .
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OS Sweet potato chlorotic fleck virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC Carlavirus; unclassified Carlavirus.
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RN [1]
RP 1-1337
RA Aritua V., Barg E., Adiapa E., Gibson R.W., Lesemann D.E., Vetten H.J.;
RT "Host range, purification and genetic variability in Sweet potato chlorotic
RT fleck virus";
RL Plant Dis. 93:87-93(2009).
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RN [2]
RP 1-1337
RA Aritua V., Barg E., Adiapa E., Gibson R.W., Lesemann D.E., Vetten H.J.;
RT ;
RL Submitted (05-JAN-2008) to the EMBL/GenBank/DDBJ databases.
RL National Agricultural Biotechnology Center, Kawanda Agricultural Research
RL Institute, 13Km Bombo Road, P. O. Box 7065, Kampala 256, Uganda
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FH Key Location/Qualifiers
FH
FT source 1. .1337
FT /organism="Sweet potato chlorotic fleck virus"
FT /host="sweet potato"
FT /isolate="TN340"
FT /mol_type="genomic RNA"
FT /country="Taiwan"
FT /db_xref="taxon:263004"
FT gene 1. .900
FT /gene="CP"
FT CDS 1. .900
FT /codon_start=1
FT /gene="CP"
FT /product="coat protein"
FT /protein_id="ACB72620.1"
FT /translation="MSNQGVETLEKGDSSKGKEKEGELTAALDGLREVKAAQGEISDQQ
FT VQRHDALIKWYMENYRPSDVANPLMQSGDKHVTLSDNLKEDAANIYSRPNFNTLLKWNR
FT EPVSQSIATAEDIAQIEAMLVGLGIPQERVRAAILDIVLYAAHSSSSPQQLYEGDVDFR
FT DANFKESISRSSVAAVIKDKSTIGKVCRLFAPVVWSYMIINNEPPSGWQAKGFPENAKF
FT AAFDTFDFVTYHAAIKPLEGIARPPNSVEYIAAQTSKRLLIDKARRNEKLCNYEASVTG
FT GQQACEIKTELKGNGKCK"
FT gene 884. .1285
FT /gene="NaBP"
FT CDS 884. .1285
FT /codon_start=1
FT /gene="NaBP"
FT /product="nucleic acid binding protein"
FT /protein_id="ACB72621.1"
FT /translation="MESANDGATGFVAVFLYGRGLLRDWDCCLLISGIVRNYNNGIRTF
FT KLFACGQSKSAIKRRARRMQICPGCAKYECGRKCEPNTHSQFQVRELVLIGVNRYLTEN
FT TTRKGTNIQRHCKNELELIKYESLKVKPK"
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SQ Sequence 1337 BP; 405 A; 255 C; 331 G; 346 T; 0 other;
eu375898 Length: 1337 24-DEC-2008 Type: N Check: 4392 ..
1 atgtctaatc aaggagttga aactctggag aaaggtgatt ccagcaaggg
51 caaggaaaag gagggggaat tgacggctgc gcttgatggt cttagggaag
101 ttaaggctgc acagggcgag atttccgatc aacaagtgca acgacatgac
151 gctttgatca agtggtacat ggagaactac cgaccttctg atgtcgcaaa
201 cccactcatg cagagtgggg ataagcatgt tacacttagc gacaatttga
251 aggaggacgc cgccaatatc tacagtaggc ccaatttcaa tacactcctt
301 aaatggaaca gagagccggt tagccagagt attgccactg cagaggatat
351 tgcacagatt gaagccatgc ttgtgggact gggtatacct caagagcgcg
401 ttagggctgc catattggac atcgtgcttt acgctgctca ttctagctcc
451 tctcctcagc agttatatga gggagatgtg gatttccgcg atgcaaattt
501 taaggaatca atatccagat cctctgtagc tgcagttatt aaagataaat
551 caactatagg gaaagtttgc cgtctgtttg cccccgtggt ctggagttac
601 atgatcatta ataatgaacc cccttccggg tggcaagcta agggttttcc
651 ggagaatgcc aaatttgccg catttgacac atttgacttt gtcacatatc
701 acgcagccat taagccattg gaagggatcg caaggccccc gaattctgtt
751 gagtatattg ctgcacagac gagcaaaaga ctcttaattg ataaggccag
801 aagaaatgaa aagctctgca attatgaggc aagtgtgaca ggagggcagc
851 aggcttgtga aatcaaaact gaattgaaag gtaatggaaa gtgcaaatga
901 tggcgccact ggctttgtcg ctgtctttct ttacggtcgt ggtctgttgc
951 gtgattggga ttgttgtctt ttaatttcag gtattgtacg taactataat
1001 aatggcatta ggaccttcaa actctttgct tgtggccaat caaaatcggc
1051 cataaagcgt agggcaagaa ggatgcaaat atgcccaggt tgtgcaaaat
1101 atgagtgtgg tagaaagtgt gagcccaata cccatagcca gttccaagtt
1151 agggagttag tgctaattgg tgtgaatagg taccttaccg aaaacaccac
1201 aagaaaaggt actaacatcc agagacattg taaaaatgaa ctggaattaa
1251 ttaaatatga aagtcttaag gtaaagccta aataatgaat aaaccattag
1301 gactataaac tttgcatgtt ttaaagcact tttgagc