Sequence of DPV Gossypium darwinii symptomless alphasatellite

Gossypium darwinii symptomless alphasatellite isolate Octa-alpha-21 segment DNA-alpha, complete sequence.

ACC No: EU384643

Dated: 2009-07-24 | Length: 1372 | CRC: -361543142

                
ID   EU384643; SV 1; circular; genomic DNA; STD; VRL; 1372 BP.
XX
AC   EU384643;
XX
DT   03-FEB-2009 (Rel. 99, Created)
DT   24-JUL-2009 (Rel. 101, Last updated, Version 2)
XX
DE   Gossypium darwinii symptomless alphasatellite isolate Octa-alpha-21 segment
DE   DNA-alpha, complete sequence.
XX
KW   .
XX
OS   Gossypium darwinii symptomless alphasatellite
OC   Viruses; Satellites; unclassified Satellites;
OC   Begomovirus-associated DNA 1-like sequences.
XX
RN   [1]
RP   1-1372
RA   Rehman M., Mansoor S., Fauquet C.;
RT   "Symptomless Reservoirs of Begomoviruses";
RL   Unpublished.
XX
RN   [2]
RP   1-1372
RA   Rehman M., Mansoor S., Fauquet C.;
RT   ;
RL   Submitted (03-JAN-2008) to the EMBL/GenBank/DDBJ databases.
RL   ILTAB, Danforth Center, 975 North Warson Road, Saint Louis, MO 63132, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1372
FT                   /organism="Gossypium darwinii symptomless alphasatellite"
FT                   /segment="DNA-alpha"
FT                   /host="Gossypium hirsutum (octaploid)"
FT                   /isolate="Octa-alpha-21"
FT                   /mol_type="genomic DNA"
FT                   /country="Pakistan:Multan"
FT                   /db_xref="taxon:656025"
FT   CDS             70. .1017
FT                   /codon_start=1
FT                   /product="replication protein"
FT                   /note="alpha rep"
FT                   /db_xref="GOA:B9TVN2"
FT                   /db_xref="InterPro:IPR013628"
FT                   /db_xref="UniProtKB/TrEMBL:B9TVN2"
FT                   /protein_id="ACC78712.1"
FT                   /translation="MPSAQSVFWCFTIFFTSASPPDLVPLFENTSVSYACWQEEESPTT
FT                   RRRHLQGYLQLKTKKSLSAVKSLFGDLNPHLEKQRARRTDEARDYCIKEETRVSGPFEF
FT                   GDYCPSGSHKRRQRESVIRSPVRMAEENPSLFRRVKAKIAEEEFQKTAHEIQIPNLKSW
FT                   AIAPKDAPGTGPRCPALSSGVYGPDGGGREINLCSRPVSKWDLVLYTWWVCLMLATSIS
FT                   VNWKYIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFLPDF
FT                   EKISQDRVHVIPCIPXGVCLKHHNINDKCEDYVD"
XX
SQ   Sequence 1372 BP; 405 A; 271 C; 311 G; 384 T; 1 other;

eu384643 Length: 1372  24-JUL-2009  Type: N  Check: 1399  ..

       1  acccagcctt gtctacctct ccttggctac ctcgtgcgaa tcacgtgagt
      51  tttcgctctc tcgcttaaga tgccttctgc tcagtctgtc ttttggtgct
     101  tcaccatttt cttcacgagt gcttctcccc ctgacttggt gcctctcttc
     151  gagaacacca gtgtgtctta tgcctgctgg caggaagaag agtcgcccac
     201  gactcgacga cgccacctgc agggatatct gcaattgaag actaaaaaat
     251  ctctctctgc ggtgaagtct ttgtttggtg atctcaatcc ccatcttgag
     301  aaacaacgag ctcgtcggac ggacgaagct cgtgactatt gtatcaaaga
     351  ggaaactagg gtttccggtc ccttcgaatt tggggattat tgccccagtg
     401  ggtctcacaa acgccggcaa agggaatcgg taattcgatc tccggtgaga
     451  atggcggagg aaaatccgtc cctcttccgg cgagtaaagg caaagattgc
     501  agaggaagaa ttccagaaga ccgcgcatga gattcaaatt ccaaatttga
     551  aatcttgggc aattgcgcct aaagacgctc ctggaacggg ccccagatgc
     601  cccgcactat cttctggggt atatgggcca gatggggggg gaagggaaat
     651  caacctttgc tcgagacctg tatcgaagtg ggacctggtt ctatacacgt
     701  ggtgggtctg cttaatgtta gctaccagta tatcggtcaa ctggaaatat
     751  attgtatttg atatccctcg tgataagaag gattatctac agtacagttt
     801  aatagagatg tttaaggata gattaatagt tagtaataag tacgagcccc
     851  ttatggctcc tttaattaat tgtatacatg tagttgttat gtctaatttt
     901  ctcccagatt tcgagaagat tagtcaggat agagtccatg taatcccgtg
     951  tataccatgn ggtgtttgtc ttaaacacca caatattaat gataaatgtg
    1001  aagattatgt ggattaatta cttttgtttc ttgaagacaa gaaagaatga
    1051  aatgaaaaaa aaacaaaaca tgagccttct actattttat ttacggaata
    1101  agtgccgcgc accgccatta aaaaaaataa aaataaaaaa gaagtataaa
    1151  atatatttat tatgtctttc taaaacgacg acgtattgga aaagtgtaaa
    1201  tgggaccaaa atgtaaatat atgaaacttc gtgattgcgg agcaaaaact
    1251  tagaaatata aggttagcgg agtaaatata tgaaagttga atggcaccgc
    1301  tgtaattact gagcttggct accaggtatc caaggatata aataacacgt
    1351  gtcgacaggc tggtgtagta tt