Sequence of DPV Chatanga virus
Chatanga virus strain LEIV-17756 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds.
ACC No: EU479697
Dated: 2010-10-08 | Length: 864 | CRC: -171543273
ID EU479697; SV 1; linear; viral cRNA; STD; VRL; 864 BP.
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AC EU479697;
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DT 05-MAR-2008 (Rel. 95, Created)
DT 08-OCT-2010 (Rel. 106, Last updated, Version 4)
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DE Chatanga virus strain LEIV-17756 nucleocapsid protein (N) and
DE non-structural protein (NSs) genes, complete cds.
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KW .
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OS Chatanga virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Orthobunyavirus.
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RN [1]
RP 1-864
RX PUBMED; 19172903.
RA Lavrent'ev M.V., Prilipov A.G., L'vov S.D., L'vov D.K.;
RT "[Phylogenetic analysis of the nucleotide sequences of Chatanga virus
RT strains, the new representative of California encephalitis serocomplex,
RT isolated in different regions of the Russian Federation]";
RL Vopr. Virusol. 53(6):25-29(2008).
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RN [2]
RP 1-864
RA Lavrentev M.V., Prilipov A.G.;
RT ;
RL Submitted (10-FEB-2008) to the EMBL/GenBank/DDBJ databases.
RL Molecular Genetics, Ivanovsky Virology Institute, Gamalei 16, Moscow
RL 123098, Russia
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FH Key Location/Qualifiers
FH
FT source 1. .864
FT /organism="Chatanga virus"
FT /segment="S"
FT /host="Aedes sp."
FT /strain="LEIV-17756"
FT /mol_type="viral cRNA"
FT /country="Russia:Iakutia"
FT /collection_date="1988"
FT /note="passaged on suckling-mice whole brains serogroup:
FT California"
FT /db_xref="taxon:507486"
FT gene 16. .723
FT /gene="N"
FT CDS 16. .723
FT /codon_start=1
FT /gene="N"
FT /product="nucleocapsid protein"
FT /note="N protein"
FT /db_xref="GOA:B1PMH3"
FT /db_xref="InterPro:IPR001784"
FT /db_xref="UniProtKB/TrEMBL:B1PMH3"
FT /protein_id="ACA50036.1"
FT /translation="MSDLVFYDVASTGANGFDPDEGYMAFCVKHGQSVNLAAVRIFFLN
FT AAKAKAALARKPEKKASPKFGEWQVEIVNNHFPGNRNNPIGNNDLTIHRLSGYLARWVL
FT EQYKENEDESQRELIKTTVINPIAESNGVRWDSGAEIYLSFFPGTEMFLETFKFYPLTI
FT GIYRVKQGMMDPQYLKKALRQRYGTLTADKWMSQKVTAIAKSLKEVEQLKWGRGGLSDT
FT ARTFLQKFGIRLP"
FT gene 35. .313
FT /gene="NSs"
FT CDS 35. .313
FT /codon_start=1
FT /gene="NSs"
FT /product="non-structural protein"
FT /note="NSs protein"
FT /db_xref="GOA:B1PMH4"
FT /db_xref="InterPro:IPR000797"
FT /db_xref="UniProtKB/TrEMBL:B1PMH4"
FT /protein_id="ACA50037.1"
FT /translation="MMSHQQVQMDLILMKGIWHSVLNMGSRSILLQLGSSSSMPQKPRL
FT LSHVSQRRRQVLNLASGRWRLSIIIFLETGTIQLVTTILPSTDCQDI"
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SQ Sequence 864 BP; 261 A; 157 C; 229 G; 217 T; 0 other;
eu479697 Length: 864 08-OCT-2010 Type: N Check: 3077 ..
1 taacttggaa gtgtgatgtc cgatttggtg ttttatgatg tcgcatcaac
51 aggtgcaaat ggatttgatc ctgatgaagg gtatatggca ttctgtgtta
101 aacatgggca gtcggtcaat cttgctgcag ttaggatctt cttcctcaat
151 gccgcaaaag ccaaggctgc tctcgcacgt aagccagaga agaaggcaag
201 tcctaaattt ggcgagtggc aggtggagat tgtcaataat cattttcctg
251 gaaacaggaa caatccaatt ggtaacaacg atcttaccat ccacagattg
301 tcaggatatc tagccagatg ggtccttgag cagtacaagg agaatgaaga
351 tgagtctcag cgcgagttga ttaaaacaac tgtcatcaac ccgattgctg
401 agtcaaatgg agtgagatgg gacagcgggg cagagatcta cttgtccttc
451 tttccaggga ctgagatgtt tttggaaaca ttcaaatttt acccgctgac
501 tattgggatt tatagagtca agcagggaat gatggatcct cagtacctga
551 agaaggcttt gagacagcgc tatggcacat tgacagctga caaatggatg
601 tcacaaaaag tgacagctat tgccaagagc ttgaaggaag tagaacagct
651 caaatgggga agaggagggc tgagtgacac tgcaagaaca ttcctgcaga
701 agttcggcat cagactccca tgagtaagaa ttggggtgtc gtaaattagg
751 gttcaaattc aaaattttgt gttaattcgg ttcaattggc tatccaaaag
801 ggttttccta agggaaccca caacaatagc agctaaatgg gtgggtggta
851 ggggacagca aaaa