Sequence of DPV Watermelon mosaic virus

Watermelon mosaic virus isolate YAZ.SH.1 polyprotein gene, partial cds.

ACC No: EU667635

Dated: 2008-05-17 | Length: 822 | CRC: -962616640

                
ID   EU667635; SV 1; linear; genomic RNA; STD; VRL; 822 BP.
XX
AC   EU667635;
XX
DT   17-MAY-2008 (Rel. 95, Created)
DT   17-MAY-2008 (Rel. 95, Last updated, Version 1)
XX
DE   Watermelon mosaic virus isolate YAZ.SH.1 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Watermelon mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-822
RA   Massumi H., Sharifi M., Shaabanian M., Heydarnejad J., Hosseini Pour A.,
RA   Rahimian H.;
RT   "Analysis of the biological and molecular variability of Watermelon mosaic
RT   virus isolates from Iran";
RL   Unpublished.
XX
RN   [2]
RP   1-822
RA   Massumi H., Sharifi M., Shaabanian M., Heydarnejad J., Hosseini Pour A.,
RA   Rahimian H.;
RT   ;
RL   Submitted (21-APR-2008) to the EMBL/GenBank/DDBJ databases.
RL   Department of Plant Protection, Shahid Bahonar, Kerman University, Kerman,
RL   Iran
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .822
FT                   /organism="Watermelon mosaic virus"
FT                   /specific_host="Cucumis melo"
FT                   /isolate="YAZ.SH.1"
FT                   /mol_type="genomic RNA"
FT                   /country="Iran"
FT                   /db_xref="taxon:146500"
FT   CDS             <1. .>822
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="ACD39420.1"
FT                   /translation="ESVSLQSGKEAVENLDAGKDLKKDTSGKGDKPQNSQTGQGSKEQT
FT                   KTGTVSKDVNVGSKGKEVPRLQKITKKMNLPTVGGKIILSLDHLLEYKPNQVDLFNTRA
FT                   TKTQFESWYSAVKVEYDLNDEQMGVIMNGFMVWCIDNGTSPDVNGVWVMMDGEEQVEYP
FT                   LKPIVENAKPTLRQIMHHFSDAAEAYIEMRNSESPYMPRYGLLRNLRDRESARYAFDFY
FT                   EVTSKTPNRAREAIAQMKAAALAGINSRLFGLDGYISTNSENTERHTARDVN"
FT   mat_peptide     19. .822
FT                   /product="coat protein"
XX
SQ   Sequence 822 BP; 296 A; 141 C; 196 G; 189 T; 0 other;

eu667635 Length: 822  17-MAY-2008  Type: N  Check: 1587  ..

       1  gaatcagtgt ctctgcaatc aggaaaagaa gcagtagaga atttggatgc
      51  agggaaggac ttgaagaagg ataccagtgg caaaggggat aagccacaaa
     101  actcgcaaac tggtcaaggt agcaaagaac agacaaaaac tggtacagtc
     151  agcaaagatg tgaatgttgg atcgaaagga aaagaagtcc cacgactaca
     201  aaagataaca aagaaaatga accttccaac agttggtggg aaaatcattc
     251  ttagcttaga ccatttactc gagtacaaac ctaatcaagt tgatctgttt
     301  aatactcgag caacaaaaac acagtttgaa tcatggtaca gcgcagtcaa
     351  agttgaatat gatcttaacg atgagcaaat gggtgtgatt atgaatggtt
     401  ttatggtttg gtgtatcgat aacggtacat ctccagatgt caatggagtt
     451  tgggtgatga tggatgggga agagcaagtt gagtacccat taaagccaat
     501  tgttgaaaat gcaaaaccaa ctttaagaca aatcatgcac catttctcag
     551  acgcagcgga agcatatatt gaaatgagaa actctgaaag tccgtatatg
     601  cctagatacg gattactaag aaacttgaga gacagggaat cagcacgcta
     651  tgcttttgac ttttatgagg ttacttccaa aacacctaat agggcaagag
     701  aagcaatagc acaaatgaag gccgcagctc tcgcgggaat taacagcagg
     751  ttatttgggc ttgatggtta tatctcgacc aattccgaaa atactgagag
     801  gcacactgca agggacgtga at