Sequence of DPV Turnip mosaic virus

Turnip mosaic virus isolate PZ-Q2 polyprotein gene, partial cds.

ACC No: EU680569

Dated: 2008-05-20 | Length: 864 | CRC: -1836623643

                
ID   EU680569; SV 1; linear; genomic RNA; STD; VRL; 864 BP.
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AC   EU680569;
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DT   20-MAY-2008 (Rel. 95, Created)
DT   20-MAY-2008 (Rel. 95, Last updated, Version 1)
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DE   Turnip mosaic virus isolate PZ-Q2 polyprotein gene, partial cds.
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KW   .
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OS   Turnip mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-864
RA   Jiang Y., Xi D., Wang J.;
RT   "Cloning and Sequence Analysis of Coat Protein Genes of Turnip Mosaic Virus
RT   isolated from Sichuan, China";
RL   Unpublished.
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RN   [2]
RP   1-864
RA   Jiang Y., Xi D., Wang J., Lin H.;
RT   ;
RL   Submitted (27-APR-2008) to the EMBL/GenBank/DDBJ databases.
RL   Key Laboratory of Bio-resources and Eco-environment (Ministry of
RL   Education), College of Life Sciences, Sichuan University, Wangjiang Road
RL   29, Chengdu, Sichuan 610064, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .864
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="PZ-Q2"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1. .>864
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="coat protein; CP"
FT                   /protein_id="ACD50935.1"
FT                   /translation="AGETLDAGLTDEQKQAEKEKKEREKAEKERERQKQLALKKGKDVA
FT                   QEEGKRDKEVNAGTSGTFSVPRLKSLTSKMRVPRYEQRMALNLDHLILYTPEQTDLSNT
FT                   RSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWCIENGTSPNINGMWVMMDGDDQVE
FT                   FPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYGLQRNLTDMSLARYAFD
FT                   FYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVENTERHTTEDVNRNMHN
FT                   LLAVKGL"
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SQ   Sequence 864 BP; 285 A; 180 C; 233 G; 166 T; 0 other;

eu680569 Length: 864  20-MAY-2008  Type: N  Check: 6997  ..

       1  gcgggtgaaa cgcttgatgc aggtttgacg gacgagcaaa agcaggcgga
      51  gaaggagaag aaggagagag agaaggcaga aaaggaacga gagaggcaga
     101  agcagttggc actcaagaaa ggcaaggatg ttgcacaaga agagggaaaa
     151  cgcgacaagg aagtaaatgc tggaacttct ggaaccttca gtgtacccag
     201  acttaagagt ctgacaagca agatgcgcgt gccaagatac gagcaaagaa
     251  tggctttaaa cctcgatcat ctaatcctat acacgccgga gcagacggat
     301  ctatccaaca cacgttcaac gcgaaagcag tttgacacat ggtttgaagg
     351  tgtaatggct gactacgaac tgacggagga caaaatgcaa atcattctca
     401  atggtttaat ggtctggtgc attgagaacg gaacctcccc gaacataaac
     451  ggaatgtggg tgatgatgga cggcgatgat caggtggaat tcccgatcaa
     501  accgctcatt gaccacgcca aacccacatt taggcagata atggcccatt
     551  tcagtgacgt agctgaagcg tacattgaaa agcgtaacca agaccgacca
     601  tacatgccac gatatggtct tcagcgcaat ttaaccgaca tgagcttagc
     651  tcgatacgca tttgatttct atgagatgac ttctagaact ccaatacgtg
     701  cgagagaagc acacatccag atgaaagcag cagcactgcg tggcgcaaat
     751  aataatttgt tcggcttgga tggaaacgtc ggtacaacgg tagagaacac
     801  ggagaggcat acgaccgagg acgttaatcg gaacatgcat aacttacttg
     851  ccgttaaggg gtta