Sequence of DPV Turnip mosaic virus

Turnip mosaic virus isolate PZ-GL polyprotein gene, partial cds.

ACC No: EU680572

Dated: 2008-05-20 | Length: 864 | CRC: 1413578893

                
ID   EU680572; SV 1; linear; genomic RNA; STD; VRL; 864 BP.
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AC   EU680572;
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DT   20-MAY-2008 (Rel. 95, Created)
DT   20-MAY-2008 (Rel. 95, Last updated, Version 1)
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DE   Turnip mosaic virus isolate PZ-GL polyprotein gene, partial cds.
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KW   .
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OS   Turnip mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-864
RA   Jiang Y., Xi D., Wang J., Lin H.;
RT   "Cloning and Sequence Analysis of Coat Protein Genes of Turnip Mosaic Virus
RT   isolated from Sichuan, China";
RL   Unpublished.
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RN   [2]
RP   1-864
RA   Jiang Y., Xi D., Wang J., Lin H.;
RT   ;
RL   Submitted (27-APR-2008) to the EMBL/GenBank/DDBJ databases.
RL   Key Laboratory of Bio-resources and Eco-environment (Ministry of
RL   Education), College of Life Sciences, Sichuan University, Wangjiang Road
RL   29, Chengdu, Sichuan 610064, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .864
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="PZ-GL"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1. .>864
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="coat protein; CP"
FT                   /protein_id="ACD50938.1"
FT                   /translation="AGETLDAGLTDEQKQAEKEKKEREKAEKERERQKQLALKKGKDVA
FT                   QEEGKRDKEVNAGTSGTFSVPRLKSLTSKMRVPRYEQRVALNLDHLILYTPEQTDLSNT
FT                   RSTRKQFDTWFEGVMADYELTEDKTQIILNGLMVWCIENGTSPNINGMWVMMDGDDQVE
FT                   FPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYGLQRNLTDMSLARYAFD
FT                   FYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVENTERHTTEDVNRNMHN
FT                   LLGVKGL"
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SQ   Sequence 864 BP; 284 A; 182 C; 235 G; 163 T; 0 other;

eu680572 Length: 864  20-MAY-2008  Type: N  Check: 5561  ..

       1  gcaggtgaaa cgcttgatgc aggtttgacg gacgagcaaa agcaggcgga
      51  gaaggagaag aaggagagag agaaggcaga aaaggaacga gagaggcaga
     101  agcagttggc actcaagaaa ggcaaggacg ttgcacaaga agagggaaaa
     151  cgcgacaagg aagtaaacgc tggaacctct ggaaccttca gtgtacccag
     201  acttaagagt ctgacaagca agatgcgcgt gccaagatac gagcaaagag
     251  tagctttaaa cctcgatcat ctaatcctat acacaccgga gcagacggat
     301  ctatccaaca cacgttcaac gcgaaagcag tttgacacat ggtttgaagg
     351  tgtaatggct gactacgaac tgacggagga caaaacgcaa atcattctca
     401  atggtttaat ggtctggtgc attgagaacg gaacctcccc gaatataaac
     451  ggaatgtggg tgatgatgga cggcgatgat caggtggaat tcccgatcaa
     501  accgctcatt gaccacgcca agcccacatt taggcagata atggcccatt
     551  tcagtgacgt agctgaagcg tacattgaga agcgtaacca agaccgacca
     601  tacatgccac gatatggtct tcagcgcaat ttaaccgaca tgagcttagc
     651  tcgatacgca tttgatttct atgaaatgac ttctaggact ccaatacgtg
     701  cgagagaggc acacatccag atgaaagcag cagcactgcg tggcgcaaat
     751  aataatttgt tcggcttgga tggaaacgtc ggtacaacgg tagagaacac
     801  ggagaggcat acgaccgagg acgttaatcg gaacatgcat aacttacttg
     851  gcgttaaggg gtta