Sequence of DPV Turnip mosaic virus

Turnip mosaic virus isolate WJ-Q polyprotein gene, partial cds.

ACC No: EU680577

Dated: 2008-05-20 | Length: 864 | CRC: 505927949

                
ID   EU680577; SV 1; linear; genomic RNA; STD; VRL; 864 BP.
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AC   EU680577;
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DT   20-MAY-2008 (Rel. 95, Created)
DT   20-MAY-2008 (Rel. 95, Last updated, Version 1)
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DE   Turnip mosaic virus isolate WJ-Q polyprotein gene, partial cds.
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KW   .
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OS   Turnip mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-864
RA   Jiang Y., Xi D., Wang J., Lin H.;
RT   "Cloning and Sequence Analysis of Coat Protein Genes of Turnip Mosaic Virus
RT   isolated from Sichuan, China";
RL   Unpublished.
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RN   [2]
RP   1-864
RA   Jiang Y., Xi D., Wang J., Lin H.;
RT   ;
RL   Submitted (27-APR-2008) to the EMBL/GenBank/DDBJ databases.
RL   Key Laboratory of Bio-resources and Eco-environment (Ministry of
RL   Education), College of Life Sciences, Sichuan University, Wangjiang Road
RL   29, Chengdu, Sichuan 610064, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .864
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="WJ-Q"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1. .>864
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="coat protein; CP"
FT                   /protein_id="ACD50943.1"
FT                   /translation="AGETLDAGLTDEQKQAEKEKKEREKAEKERERQKQLALKKGKDVA
FT                   QEEGKRDKEVNAGTSGTFSVPRLKSLTSKMRVPRYEQRVXLNLDHLILYTPEQTDLSNT
FT                   RSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWCIENGTSPNINGMWVMMDGDDQVE
FT                   FPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYGLQRNLTDMSLARYAFD
FT                   FYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTEENTERHTTEDVNRNMHN
FT                   LLGVKGL"
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SQ   Sequence 864 BP; 286 A; 180 C; 234 G; 162 T; 2 other;

eu680577 Length: 864  20-MAY-2008  Type: N  Check: 6964  ..

       1  gcaggtgaaa cgcttgatgc aggtttgacg gacgagcaaa agcaggcgga
      51  gaaggagaag aaggagagag agaaggcaga aaaggaacga gagaggcaga
     101  agcagttagc actcaagaaa ggcaaggatg ttgcacaaga agagggaaaa
     151  cgcgacaagg aagtaaacgc tggaacctct ggaaccttca gtgtacccag
     201  actcaagagt ttgacaagca agatgcgcgt gccgagatac gagcaaagag
     251  tggytytaaa cctcgatcat ctaatcctat acacgccgga gcagacggat
     301  ctatccaaca cacgttcaac gcgaaagcag tttgatacat ggtttgaagg
     351  tgtgatggct gactacgaac tgacggagga caaaatgcaa atcattctca
     401  atggtttaat ggtctggtgc attgagaacg gaacctcccc gaacataaac
     451  ggaatgtggg tgatgatgga cggcgatgat caggtggaat tcccgatcaa
     501  accgctcatt gaccacgcca aacccacatt taggcagata atggcccatt
     551  tcagtgacgt agctgaagcg tacattgaaa agcgtaacca agaccgacca
     601  tacatgccac gatatggtct tcagcgcaat ttaaccgaca tgagcttagc
     651  tcgatacgcg tttgatttct atgaaatgac ttctagaact ccaatacgtg
     701  cgagagaagc acacatccag atgaaagcag cagcactgcg tggcgcaaat
     751  aacaatttgt tcggcttgga tggaaacgtt ggtacaacgg aagagaacac
     801  ggagagacac acgaccgagg acgttaatcg gaacatgcat aacttacttg
     851  gcgttaaggg gtta