Sequence of DPV Bean common mosaic virus
Bean common mosaic virus strain NL-1n polyprotein gene, partial cds.
ACC No: EU713858
Dated: 2008-06-27 | Length: 1294 | CRC: -682234304
ID EU713858; SV 1; linear; genomic RNA; STD; VRL; 1294 BP.
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AC EU713858;
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DT 27-JUN-2008 (Rel. 96, Created)
DT 27-JUN-2008 (Rel. 96, Last updated, Version 1)
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DE Bean common mosaic virus strain NL-1n polyprotein gene, partial cds.
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KW .
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OS Bean common mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
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RN [1]
RP 1-1294
RA Sharma P., Sharma P.N., Kapoor V., Kapil R., Sharma O.P.;
RT "Complete coat protein sequence of necrotic isolate (NL-1n) of BCMV
RT infecting common bean in India";
RL Unpublished.
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RN [2]
RP 1-1294
RA Sharma P., Sharma P.N., Kapoor V., Kapil R., Sharma O.P.;
RT ;
RL Submitted (10-MAY-2008) to the EMBL/GenBank/DDBJ databases.
RL Molecular Plant Pathology Laboratory, CSK HPAU, Palampur, H.P. 176062,
RL India
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FH Key Location/Qualifiers
FH
FT source 1. .1294
FT /organism="Bean common mosaic virus"
FT /specific_host="common bean"
FT /strain="NL-1n"
FT /mol_type="genomic RNA"
FT /country="India"
FT /collection_date="Aug-2005"
FT /virion
FT /PCR_primers="fwd_seq: tggctgcttgagagagatga, rev_seq:
FT atcactctgcatgtcctcac"
FT /db_xref="taxon:12196"
FT CDS <1. .1084
FT /codon_start=2
FT /product="polyprotein"
FT /protein_id="ACE95678.1"
FT /translation="RMSPAIEARDSIWLLERDELREIAASGGAPYIAESALKTLYTNKK
FT TRIEELAKYLEVLDFDYEVGCGESVHLQSGTGQPQPPIVDAGVESGKDKKEKSNKGKDP
FT ESREGAGNNNRGAGNSAMRDKDVNAGSKGKVVPRLQKITKRMNLPMVKGNVILNLDHLL
FT DYKPEQTDLFNTRATKMQFEMWYNAVKAEYEIDDDQMSIVMNGFMVWCIDNGTSPDVNG
FT TWVMMDGDEQVEYPLKPMVENAKPTLRQIMHHFSDAAEAYIEMRNSERPYMPRYGLLRN
FT LRDKNLARYAFDFYEVTSKTSDRAREAVALMKAAALSNVSSKLFGLDGNVATTSENTER
FT HTARDVNQNMHTLLGMGPPQ"
FT mat_peptide <1. .220
FT /product="Nib 1"
FT mat_peptide 221. .1081
FT /product="coat protein"
FT 3'UTR 1085. .1293
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SQ Sequence 1294 BP; 417 A; 237 C; 336 G; 304 T; 0 other;
eu713858 Length: 1294 27-JUN-2008 Type: N Check: 757 ..
1 acgcatgtcg cccgcgattg aggcgcggga ttcgatttgg ctgcttgaga
51 gagatgagct gagagagatt gcagctagtg gaggagcccc atacatagca
101 gagtcagcac ttaaaactct ttacactaat aagaaaacaa ggattgaaga
151 gttagcaaaa tatctggaag tgctcgactt cgactacgag gtaggatgcg
201 gagaatctgt gcacctacaa tcaggaactg gacagccaca gccaccaata
251 gtagatgctg gtgtggaatc tgggaaggac aagaaagaga aaagcaacaa
301 aggaaaggac ccagaaagca gggaaggggc aggaaacaac aaccgtggtg
351 cagggaattc ggcaatgaga gacaaggatg tgaatgcagg ttccaaaggg
401 aaggttgttc ctcggcttca aaagatcaca aaaaggatga atttgcccat
451 ggtgaaaggg aatgtgatct taaatttaga tcatctattg gattacaagc
501 cagaacaaac tgatcttttt aacacaagag caacaaagat gcagtttgaa
551 atgtggtaca atgctgtgaa ggctgagtat gaaatagatg atgatcagat
601 gtcaattgta atgaacggct ttatggtgtg gtgtattgac aatggcactt
651 caccggatgt gaacggcact tgggtaatga tggatggaga tgagcaagtg
701 gaatatccac tcaaaccaat ggttgaaaat gcaaagccaa cactccgcca
751 aatcatgcac catttttcag atgcagctga agcatacatt gagatgagaa
801 attccgagag gccatatatg cctaggtacg gactacttcg gaatttgagg
851 gataaaaatc tagctcgcta cgcttttgat ttctatgaag taacatccaa
901 aacatcggat cgagcaagag aagcagtagc actgatgaag gcagcagccc
951 tcagcaacgt tagcagcaag ttgtttggac ttgatggtaa cgtggcaaca
1001 accagcgaga atactgaaag gcacactgca agggacgtca atcagaacat
1051 gcacacactt cttggcatgg gtcctccgca gtaaaggtga ggtaaactaa
1101 ccacagttag catctcgcgt cgctgaatag tttcatatag taatctttta
1151 tgttctcttt agtttcagtg tggttctacc acctttgtgt tactattgtg
1201 atagtgtggt tggtccacca acatattgtg agtactttat gtttatgagt
1251 aagccggaag aaccattgca atggtgagga catgcagagt gata