Sequence of DPV Pepper veinal mottle virus

Pepper veinal mottle virus isolate Tom1 coat protein gene, partial cds.

ACC No: EU719647

Dated: 2010-09-07 | Length: 1189 | CRC: 1599523692

                
ID   EU719647; SV 1; linear; genomic RNA; STD; VRL; 1189 BP.
XX
AC   EU719647;
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DT   12-JUN-2008 (Rel. 96, Created)
DT   07-SEP-2010 (Rel. 106, Last updated, Version 2)
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DE   Pepper veinal mottle virus isolate Tom1 coat protein gene, partial cds.
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KW   .
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OS   Pepper veinal mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-1189
RX   AGRICOLA; IND44161408.
RX   DOI; 10.1094/PDIS-93-1-0107A.
RA   Cheng Y.-H., Wang R.Y., Chen C.-C., Chang C.-A., Jan F.-J.;
RT   "First Report of Pepper veinal mottle virus in Tomato and Pepper in
RT   Taiwan";
RL   Plant Dis. 93(1):107-107(2009).
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RN   [2]
RP   1-1189
RA   Cheng Y.-H., Jan F.-J., Chang C.-A.;
RT   ;
RL   Submitted (14-MAY-2008) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, Agricultural Research Institute, 189 Chung-Cheng Road,
RL   Taichung County, Taiwan 41301, Republic of China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1189
FT                   /organism="Pepper veinal mottle virus"
FT                   /host="Lycopersicon esculentum Mill."
FT                   /lab_host="Nicotiana benthamiana"
FT                   /isolate="Tom1"
FT                   /mol_type="genomic RNA"
FT                   /country="Taiwan"
FT                   /db_xref="taxon:255066"
FT   CDS             <1. .813
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /db_xref="GOA:B3GQU1"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:B3GQU1"
FT                   /protein_id="ACE00233.1"
FT                   /translation="AGETVDAGKSSGKEVTASKQPTTSQPTEAKTVLDRDVNAGTQGTF
FT                   TIPRLKGMSSKLTLPKVSSQSVVNLEHLLNYKPDQVHLSNTRALQSQFASWYNGVKNDY
FT                   DVDDEQMKIILNGLMVWCIENGTSPNINGMWVMVDGEEQIEYPIKPLIDHAKPSFRQIM
FT                   AHFSNLAEAYIEKRNSEKSYMPRYGLQRNLTDMSLARYAFDFYEMTSKTPVRAREAHIQ
FT                   MKAAALRNANNRMFGLDGKVGTQEEDTERHTAEDVNRNMHNLLGVRGV"
XX
SQ   Sequence 1189 BP; 354 A; 215 C; 276 G; 344 T; 0 other;

eu719647 Length: 1189  07-SEP-2010  Type: N  Check: 3188  ..

       1  gctggtgaga ctgtcgatgc aggaaagagt tcaggcaaag aagtgacagc
      51  atcaaaacaa ccgactacca gccagccaac agaagcaaag actgttctag
     101  atcgagacgt caatgcagga acacagggga ctttcacaat accaaggctt
     151  aaaggaatgt cttcgaaatt gactctaccc aaagtcagtt ctcaaagtgt
     201  tgttaatcta gaacatctgt tgaattataa gccggaccaa gttcatctaa
     251  gcaatacacg ggcattacag tcacaatttg cttcctggta taatggggta
     301  aagaatgact atgatgttga tgatgaacag atgaaaatta tcttgaatgg
     351  cttaatggtt tggtgtatag aaaatgggac atcgcctaac atcaacggga
     401  tgtgggtgat ggttgatggt gaagagcaga ttgaatatcc aattaagcca
     451  ttgattgatc atgccaaacc ttcatttcga caaatcatgg cgcatttcag
     501  taacctggct gaagcgtaca ttgagaagcg caattcggag aagtcttata
     551  tgccaagata tggacttcaa agaaatctta ccgatatgtc attagcgcga
     601  tatgcttttg atttctatga aatgacatca aaaactcccg ttcgagcacg
     651  tgaagctcat attcaaatga aggctgcagc tttgcgcaat gccaacaatc
     701  gaatgttcgg actggacggt aaggtaggca cacaggagga ggataccgaa
     751  aggcacactg ctgaagatgt gaacaggaat atgcacaatc ttcttggtgt
     801  tcgaggagta tgagtactta cttttatata atagtaaaca atacatatat
     851  agtatataat agcttggtct atgtttctgg gttcgtgtat tcctcagtgt
     901  ggtttccacc ataggttatt cgagactagt ttcctactat atatttggcc
     951  agtgttggtt tcattttgtc ttactaaagt gtgaactttc acggtggtgg
    1001  cttgacattt tgttgccacg ctagcttaat aaagtgtttt gtttagtatt
    1051  ttataactaa gtaactgtgt aaccctgccg gctttagcgt ggttatacca
    1101  cctgatagag tctggcggca aaaattgtgt ttatggcttg cagtgagtga
    1151  ggtcgtacct cgtctacaag cggtttcata attggcgct