Sequence of DPV Massilia virus
Massilia virus strain W segment L, complete sequence.
ACC No: EU725771
Dated: 2010-05-13 | Length: 6402 | CRC: -1016753808
ID EU725771; SV 1; linear; genomic RNA; STD; VRL; 6402 BP.
XX
AC EU725771; DQ656074;
XX
DT 05-OCT-2008 (Rel. 97, Created)
DT 13-MAY-2010 (Rel. 104, Last updated, Version 2)
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DE Massilia virus strain W segment L, complete sequence.
XX
KW .
XX
OS Massilia virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Phlebovirus.
XX
RN [1]
RP 1-6402
RX PUBMED; 19055373.
RA Charrel R.N., Moureau G., Temmam S., Izri A., Marty P., Parola P.,
RA da Rosa A.T., Tesh R.B., de Lamballerie X.;
RT "Massilia virus, a novel Phlebovirus (Bunyaviridae) isolated from sandflies
RT in the Mediterranean";
RL Vector Borne Zoonotic Dis. 9(5):519-530(2009).
XX
RN [2]
RP 1-6402
RA Temmam S., Charrel R.N., Izri A., Delaunay P., Toga I., Dumon H., Marty P.,
RA Parola P., De Lamballerie X.N.;
RT ;
RL Submitted (24-MAY-2006) to the EMBL/GenBank/DDBJ databases.
RL Unite des Virus Emergents, Universite de la Mediterranee, 27, boulevard
RL Jean Moulin, Marseille 13005, France
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RN [3]
RC Sequence update by submitter
RP 1-6402
RA Charrel R.N., Moureau G., Temmam S., Izri A., de Lamballerie X.;
RT ;
RL Submitted (28-APR-2008) to the EMBL/GenBank/DDBJ databases.
RL Unite des Virus Emergents (UMR190), Univ. de la Mediterranee-IRD, 27 blvd.
RL Jean Moulin, Marseille 13005, France
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CC On Oct 5, 2008 this sequence version replaced gi:110225428.
CC GenBank Accession Numbers EU725771-EU725773 represent the complete
CC genome of Massilia virus strain W.
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FH Key Location/Qualifiers
FH
FT source 1. .6402
FT /organism="Massilia virus"
FT /segment="L"
FT /host="Phlebotomus perniciosus"
FT /strain="W"
FT /mol_type="genomic RNA"
FT /country="France:Marseilles"
FT /collection_date="Jul-2005"
FT /db_xref="taxon:391640"
FT CDS complement(97. .6384)
FT /codon_start=1
FT /product="RNA-dependent RNA polymerase"
FT /db_xref="GOA:B6A8C8"
FT /db_xref="InterPro:IPR007099"
FT /db_xref="InterPro:IPR007322"
FT /db_xref="UniProtKB/TrEMBL:B6A8C8"
FT /protein_id="ABG56143.2"
FT /translation="MERILRKQPNPEGSLTIHQLRRYESTIYDSPIPAYVIKHSSEGVA
FT IDIATAELADGQSGSTIQPFETIPAQNLTLFKHDYTFGHLADTTDRRFVEVFGVLENRA
FT DDADFLTPDMIIESETGHVYVVEFTTTMGDANSADLAARNKIAKYEIACLNRSAIKPIS
FT LYVIAVHFNGVVSNLELSDDDVNEIVFRFRLARDIFEELREINPALFDSDETISRLDRE
FT VNSIMSSIKIDWKVTEAKFPSFRKLLFDRFNQMEADNDYIARIVKKCTDEAIKGIERDN
FT YYTDDISNDERMQKNSHTATAEINNKIAEMISYEFLRDPNDHKSTVQFPSWITHEGSPG
FT KGLEPLKSVSVEGSHPMSRIWAKVCTNATIEKIDRMNDDPVQELEYAMSGSTERSVERN
FT KYHRTVLTLNQDEREYAAVLGVCGKKNSSLGAVKEARIRSKKGFSIEHDISRVSDFLSS
FT DDMSALKPSDELYNPLSKDFNLRKLAMGLHQPTLVHADGLTPETLSCHMDLLSTPVGSW
FT LQMVSLIGAELSASVKQHVKPNQFIVKRLMDSGVYLLIKPTTSKGHIFVSLAVDKKVLA
FT GELDNSGIFKPGIDSGDMVVTDFVSFKLSKITNLCKAASVMEASICFWAECYGYEPWKF
FT LKHVEERRFKEAWFMMKLSLLTMLEDKATTEELQTMQRYVVMEGFVSLPEIPRPQKMLS
FT KVPKVLRSELQVFLAQRLFSAIQRIARQPFALHKMGSTIRWKGMFNPFSGDPIDELQIL
FT ISCCYNGYFKNKEEESEPSALSAMYKKIIELEHLRPLDDLYLGYNDPEQPKMHEFSRSY
FT LKILCDHAKAKLRRQYGRGVMTQIENSIIREVSSITLERLATLKATSNFNDGWYVYKEV
FT KDKNYTRDKLLVKMTKFAHRGKTLAIEMFDECMNRIEGKGCMEICLFKKQQHGGLREIY
FT VMGADERIVQSVIEAIARAIGRFFDSDTLCNPTNKMRIPETHGQRAKKRCGRSVWTCAT
FT SDDARKWNQGHFVTKFALMLCQFTPEEWWPLIIRGCSMFTNKFMMMNLDFLRIIDSHKE
FT LNIEDDFVTKLFKAYHGETTEPWIEPGRTYLKTSTGMMQGILHFTSSLLHSLHQEFIRT
FT ASLQLFTQRMGSDAASKVVCDMMQGSDDSSMIISFPADNERMRMRYKLVAAMCFRIKKS
FT LGVYVGIYPSEKSTSNTDFVMEYNSEFFFHSQHVRPTVRWIAASCSLPEVETLVARQEE
FT AANLLTSITEGGGSFSLAAMVQQSQCTIHYMLMGLGVSALFGEFEKAISKWLDPGLGFF
FT LFDNPYSAGLSGFKYNLYRAILGSSLKSVYSFFMKRVKGSSEKADGIISESCSVSPGGA
FT IVMSSTLRWGSVEKFKKLRNRLNIPEDWREMINESPEVLYRAPQTGTEIMLRIAEKVHS
FT PGVVSSLSTGNAVCKVMASSVYFLSACIFEDAGNQEYKVMNSDKYSLLQKIIAFNQFEE
FT GDSISQEDLLFLFPNLSEFEAFDSNIYDKGSFNVVPRASQREATQTRIVVFEHHSSARV
FT APEKLVSDKWFGTRKSKIGSAGFKQEWDRLKTIVRWLRDAPSDTLESSPFSNHVQIRNF
FT FARMEGKPRVIKVTGAPVKKRSGMSKIAMAIRDNFCKVGYIQGLEDEVGHSRAMQVEKI
FT KHYLFSVLMGPYTESAKLEYIVRILSEEPQVVLNYNDKRSRANTISLLQRFIKNDVGIA
FT ALIEDMKAGIFGAFTKVQQFSQSSINHKYYGKGIWKGIMDGYQLQIEVDGKEGMPSYLS
FT SITISNCSKPWVLTQSLKAWCEDMQVSNSTDLSKSHKNANYWIYGFKMYGSSYPYGCPI
FT YIVRGDITDLGLLHDDDIDIKVRRNTVNLYVKSKDKRPRDLHILSYTPSDSDISSVSSK
FT HIMEDEFFVYKGLFSVEPTRSWMLCQPLPWKFVRPVVQLASGQRTAPKQIDTTRLREII
FT RLCTESSIRNKIGTVYSQTRPESLIESEPIDMSDMFDMMIEEGMDETFEDLADFLTVDE
FT DPDYMAEVDFDEESLNLFGPAHYKELQSLTILAHPLMDGFVTRLVTRFGRAKIRRLLEK
FT SIITSDCREVAELLFLALERDPSQIKDELIQGDSPTDVPDDLLG"
XX
SQ Sequence 6402 BP; 1681 A; 1553 C; 1182 G; 1986 T; 0 other;
eu725771 Length: 6402 13-MAY-2010 Type: N Check: 9152 ..
1 acaaagaccg cccaattctt acaaaaccta aaacaactaa acactcacac
51 aacgttgacc catgaacacg aacaaatata ctatttctca cacgcactac
101 ccaagaaggt cgtcaggaac gtcagtgggg ctatcacctt gaatcaactc
151 atcctttatt tgagatggat ccctctccag agccaaaaag agtaactcag
201 caacctctct acagtcagag gtaatgattg atttttctaa tagccttctg
251 atcttagccc tcccaaaccg tgtgacaagt ctggttacaa acccatccat
301 cagtggatgt gctaatatcg tcagactctg aagttctttg taatgcgctg
351 gcccaaagag gttcaagctc tcctcatcaa agtctacttc cgccatgtag
401 tcagggtctt catcaactgt gaggaaatca gccagatcct caaaagtttc
451 atccatacct tcttctatca tcatgtcaaa catatcactc atatcaattg
501 gttctgactc aattaagctc tctggtcttg tctggctgta aactgtgcct
551 atcttgttcc tgatggatga ttctgtgcac agcctgatta tttctctcag
601 tcttgtggtg tcaatctgct ttggtgcagt tctctggcca gaagcaagtt
651 gcactactgg tctaacgaat ttccatggca gtggctgaca gagcatccag
701 gatcttgttg gctcaacaga aaacagaccc ttgtacacaa agaattcatc
751 ttccatgatg tgttttgagc taactgagct tatatctgaa tctgaaggag
801 tgtatgataa gatgtgcaga tcacgaggtc tcttatcttt gctcttcaca
851 taaagattga ctgtattgcg tctcacttta atgtctatat catcatcatg
901 taataagcca aggtctgtga tgtcacccct gactatgtag attgggcacc
951 catatggata agatgatcca tacatcttaa aaccataaat ccagtaattt
1001 gcattcttgt gactttttga gagatcagta ctgttagaga cttgcatgtc
1051 ctcacaccat gccttcagac tctgagtcaa cacccagggt tttgagcagt
1101 tagatatcgt tatggagctc aaatatgagg gcatgccttc cttcccatct
1151 acttctatct gcagctgata gccatccatt atccctttcc agatcccttt
1201 gccatagtac ttatgattga tagatgactg actgaattgc tgtaccttcg
1251 tgaaggcacc aaatatccca gctttcatgt cttctataag agctgctata
1301 cccacatcgt tcttgatgaa tctttgaagt aggctgatcg tgtttgctct
1351 tgacctcttg tcattataat tcaataccac ctgaggctcc tcactcaaaa
1401 tcctcactat gtattccagc ttagcactct cagtataggg gcccattagt
1451 actgagaata agtaatgctt aattttctcc acctgcattg ctctgctatg
1501 gccaacctca tcttccaagc cttggatata accaaccttg caaaagttgt
1551 cccgtattgc catggcaatc ttactcattc ctgacctttt cttcactgga
1601 gcccctgtga ctttgattac tcgtggtttg ccttccattc tggcgaagaa
1651 gtttctgatt tggacatgat tagagaaagg agaactctcc aatgtatctg
1701 aaggagcatc tctcagccac ctcacaattg ttttcaatct gtcccactcc
1751 tgcttgaagc ctgctgagcc aatcttgctt ttccttgttc cgaaccactt
1801 atcactaacc aatttctctg gagcaacacg agctgatgaa tgatgctcaa
1851 acacgacaat cctggtttga gttgcttctc tttggcttgc ccgtgggacc
1901 acattaaagc tccccttatc ataaatgttg gaatcaaaag cctcaaattc
1951 tgacaggttt ggaaagagaa atagcagatc ctcctgactg atgctatcac
2001 cctcctcaaa ttggttgaag gcaattatct tctgtaataa gctgtacttg
2051 tcactgttca tgactttata ttcttggttt cccgcatctt caaatatgca
2101 tgcagataag aaatagacag aggatgccat caccttacat actgcattgc
2151 ctgtgctcag agatgagaca actcctgggc tatggacctt ttctgctatg
2201 cgtagcatta tctctgttcc tgtctgaggt gccctgtata acacttccgg
2251 agactcatta atcatttctc tccaatcctc tgggatattc aacctgttcc
2301 tcaacttctt gaatttctca actgaacccc atcttagtgt tgaactcatc
2351 actattgcac ctcctgggct gacactacaa gactcactga taataccatc
2401 agctttctct gacgagcctt taaccctttt catgaagaag gagtatactg
2451 acttaagact tgacccaagg atagctctgt acaagttata cttaaaccct
2501 gaaagccctg cagagtatgg gttatcaaac aagaagaatc caagacctgg
2551 atccagccac tttgagattg ccttttcaaa ctctccaaaa agagcactca
2601 ctccaagacc catcaacatg tagtggatag tacactggct ctgctgaacc
2651 atagctgcaa gtgagaaaga ccctccccct tcagttattg atgttaaaag
2701 gtttgcagct tcctcctgcc tggcaacaag agtttctact tctggtagag
2751 agcatgatgc agcaatccat ctcactgtag gcctaacatg ctgcgagtgg
2801 aagaaaaatt ctgagttgta ttccatcaca aagtccgtgt tcgaggtaga
2851 cttttcagat gggtagattc ccacatagac accaagagac ttctttatcc
2901 tgaagcacat tgctgcaacc aatttgtacc gcattctcat cctttcattg
2951 tctgctggga agctgattat catgctgcta tcatctgagc cctgcatcat
3001 atcgcagaca acttttgaag ctgcatctga acccattctt tgtgtgaaga
3051 gctgtaagga agctgttctt ataaactctt ggtgtagaga gtgcagcaga
3101 gaagaagtaa aatgaagaat tccttgcatc ataccagtgc ttgttttaag
3151 ataagttctc ccaggttcaa tccatggctc agtagtctca ccatgatatg
3201 ctttgaaaag cttagtgaca aagtcatcct ctatgttaag ctccttatga
3251 ctgtcaatga ttcttaggaa atctaaattc atcatcataa acttgttggt
3301 gaacattgaa caacctctga taattaaagg ccaccattct tctggagtga
3351 actggcatag catcaaggca aacttagtaa caaagtggcc ttgattccac
3401 ttcctagcat catctgatgt tgcacaagtc caaacggatc ttccacacct
3451 cttttttgct ctctgaccat gagtctctgg tattctcatc ttgttggtag
3501 ggttgcatag tgtgtcagaa tcgaagaatc tgccaattgc gcgagctatt
3551 gcttcaatta cagactgcac aattctctca tcagccccca tcacataaat
3601 ttccctcaaa cctccatgct gctgcttctt gaagagacag atttccatgc
3651 agcccttccc ctcaatcctg ttcatgcact catcaaacat ctcaattgct
3701 agagtctttc ctctatgggc aaacttagtc atcttaacta agagtttgtc
3751 tcttgtgtaa ttcttatcct tcacctcttt gtagacatac caaccatcat
3801 taaaattact agttgccttt agagtggcca gtctttcgag agtaattgag
3851 gagacttctc ttattatgct gttctctatc tgggtcataa cccctcgtcc
3901 atactgcctt ctgagcttag cttttgcatg gtcacacaga atcttcagat
3951 aacttctgct gaattcatgc attttgggct gctctgggtc attgtaccct
4001 aggtacagat catctagcgg tcttaagtgc tcaagctcta taatcttctt
4051 gtacattgct gacaaggctg acggttctga ttcttcttct ttatttttga
4101 agtaaccatt gtaacagcag ctgatgagta tctgcaactc atcaattggg
4151 tctcccgaga aaggattaaa catccccttc catcttattg tgcttcccat
4201 cttatgaaga gcaaaaggct gtcttgcaat gcgctgaatg gctgagaaga
4251 gtctctgtgc aaggaatact tgtagttctg acctcagtac tttgggcact
4301 ttagatagca tcttctgtgg acgtggaatc tcaggtagag acacaaagcc
4351 ttccataacc acatatctct gcattgtttg cagttcttct gtggtagctt
4401 tgtcttctag catggtgagt agtgacagct tcatcataaa ccacgcctcc
4451 ttgaatcttc tctcctccac atgcttcaag aacttccatg gctcatatcc
4501 atagcactca gcccagaagc agattgaggc ttccataacc gacgcagcct
4551 tgcaaagatt agttatcttg ctcagtttga aagaaacaaa gtcagtaaca
4601 accatgtccc ctgaatcaat tcctggctta aatattcctg agttgtccag
4651 ctctccagcg aggacttttt tgtcaacagc caaggagaca aatatatgac
4701 ccttagaagt agttggcttg atcagtaagt agacgcctga atccatgagc
4751 ctcttgacaa tgaactggtt tggcttaaca tgttgtttta ctgaagcaga
4801 tagctctgca ccaatcagtg aaaccatttg caaccagctc ccaactggtg
4851 tgctcagtag atccatgtga caggatagtg tctctggtgt cagcccatct
4901 gcatggacaa gagttggctg gtgtagtccc attgccagct ttctcaggtt
4951 gaagtcttta cttagtggat tatacaattc atctgatggc tttagagcag
5001 acatgtcatc agagctcaag aaatcagaaa ctctgctaat atcatgctct
5051 attgaaaatc cttttttgct ccttatcctg gcttccttaa cagctccaag
5101 agatgagttc ttcttcccac acacccccaa tactgctgca tattctctct
5151 catcctggtt taaggtcaat actgttctgt gatatttgtt cctctcaaca
5201 gatctttctg tgctcccaga catggcatac tccaattctt gtacaggatc
5251 atcattcatc ctgtcaatct tctcaatcgt ggcgttggta cagaccttgg
5301 cccatattct actcatggga tgagagcctt ctacactgac agatttcaaa
5351 ggttccagac ccttcccagg tgatccttca tgagtgatcc atgagggaaa
5401 ctgaactgtt gacttatggt cattgggatc tctaagaaac tcatagctga
5451 tcatctctgc aatcttgttg ttgatttctg ctgttgcagt gtgtgaattt
5501 ttctgcattc tctcatcatt tgatatgtcg tcagtatagt aattgtccct
5551 ttcaatgcct tttatggcct catccgtgca cttcttcaca attcttgcaa
5601 tgtaatcatt atctgcttcc atctgattga acctatcaaa cagaagtttt
5651 ctgaagcttg gaaactttgc ctcagtcact ttccaatcta ttttgattga
5701 tgacattatg ctgttaactt ccctgtcaag cctgctaatt gtttcgtcag
5751 aatcaaataa agctgggttg atttctctta gttcttcaaa aatgtccctg
5801 gcaagtctaa atcggaagac aatctcattc acatcatcat ctgacagctc
5851 cagattagaa accactccat taaaatgcac tgcaattaca tacagagata
5901 ttggctttat tgctgaccta tttagacagg caatctcata ctttgctatc
5951 ttgttcctag ctgcaagatc ggctgagttg gcatcaccca ttgtagtggt
6001 aaactccacc acataaacgt gaccagtctc tgattcaata atcatgtcag
6051 gagtcaagaa gtcagcatca tcagctctgt tctcaagaac accaaacact
6101 tccacaaacc ttctgtcagt cgtgtcagct agatggccaa aagtgtaatc
6151 atgcttaaat aaagtgaggt tttgggctgg tattgtctca aagggctgga
6201 tagtagaacc agactgccca tctgctagct ctgctgttgc tatgtctatc
6251 gccacccctt ctgagctatg cttaataaca taggcaggga tcggggaatc
6301 atagatcgta gactcataac gtctcaactg atgaattgtt aagctcccct
6351 caggatttgg ttgttttctc aggattcttt ccatatttgg gcctctctgt
6401 gt